Circular RNAs (circRNAs) are a novel group of recently discovered class of non-coding RNAs which are formed by back-splicing of pre-RNA transcript. In recent years, studies have published genome-wide circRNA-transcriptome in a number of organisms including human, cell lines, plants and animals. We have created a manually curated database, CircRNome, which is a compiled database for both animal and plants comprising predicted as well as validated cirRNAs for each organism. This serves the most updated database created for circRNAs.
- Chromalveolata
- Microsporidia
- Dihaplophasea
- Dissociodihaplophasida
- Nosematidae
- Dissociodihaplophasida
- Dihaplophasea
- Microsporidia
- Metazoa
- Bilateria
- Deuterostoma
- Chordata
- Vertebrata
- Amphibia
- Aves
- Mammals
- Primates
- Cercopithecidae
- Hominidae
- Rodentia
- Ruminantia
- Suina
- Primates
- Teleostei
- Vertebrata
- Chordata
- Ecdysozoa
- Arthropoda
- Hexapoda
- Nematoda
- Arthropoda
- Deuterostoma
- Bilateria
- Viridiplantae
- Magnoliophyta
- eudicotyledons
- Actinidiaceae
- Brassicaceae
- Fabaceae
- Malvaceae
- Rutaceae
- Solanaceae
- Theaceae
- monocotyledons
- eudicotyledons
- Magnoliophyta
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- Organism No. of circRNAs (Validated)
- Actinidia deliciosa 3651 (68)
- Arabidopsis thaliana 140736
- Bombyx mori 9765 (11)
- Bos taurus 14097 (8)
- Brachypodium distachyon 805
- Caenorhabditis elegans 9754 (10)
- Camellia sinensis 3222 (48)
- Latimeria chalumnae 1892
- Danio rerio 12360 (45)
- Drosophila melanogaster 58335 (8)
- Gallus gallus domesticus 13386 (8)
- Glycine max 6605 (10)
- Gossypium arboreum 1041
- Gossypium hirsutum 519 (19)
- Gossypium raimondii 1480 (1)
- Gossypium(interspecies) 1311
- Homo sapiens 1058494 (563)
- Hordeum vulgare 4392 (23)
- Macaca mulatta 2509 (7)
- Mus musculus 207921 (109)
- Nosema ceranae 204
- Oryza sativa 66082 (29)
- Ovis aries 11152 (39)
- Poncirus trifoliata 574 (17)
- Rattus rattus 46199 (30)
- Solanum lycopersicum 2209
- Solanum tuberosum 2112 (13)
- Sus scrofa 15493 (7)
- Triticum aestivum 3959 (16)
- Xenopus laevis 297 (10)
- Zea mays 4642 (34)
- Total 2680329
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