| Aliases | hsa_circ_0035381 | Scientific name | Homo sapiens (hg19) | ||||
| Organism | Human | Genome Locus | chr15:55621921-55634000:+ | ||||
| CircRNA type | . | Gene ID | ENSG00000166450.12 | ||||
| Gene Name | PRTG | Detection pipeline | . | ||||
| Sample Type | K562; Huvec; A549 | ||||||||
| Method for Estimation | RNA-Seq with Rnase R resistance | ||||||||
| Circular RNA status | Experimented | PCR Details | Link to the detailed experimental procedure | ||||||
| Primers (Experimented) | |||||||||
| Primers (Validated) | |||||||||
| Forward Primer | . | ||||||||
| Reverse Primer | . | ||||||||
| Aliases | HSA_CIRCpedia_14805 | Scientific name | Homo sapiens (hg19) | ||||
| Organism | Human | Genome Locus | chr15:55621921-55634000 | ||||
| CircRNA type | . | Gene ID | NA | ||||
| Gene Name | NA | Detection pipeline | . | ||||
| Sample Type | Occipital;Cerebellum;Parietal;A549;Heart;HUVEC;Cortex;K562 | ||||||||
| Method for Estimation | Ribo-;poly(A)- | ||||||||
| Circular RNA status | Experimented | PCR Details | Link to the detailed experimental procedure | ||||||
| Primers (Experimented) | |||||||||
| Primers (Validated) | |||||||||
| Forward Primer | . | ||||||||
| Reverse Primer | . | ||||||||
| Aliases | hsa_circRNA_101525 | Scientific name | Homo sapiens (hg19) | ||||
| Organism | Human | Genome Locus | chr15:55621921-55634000:+ | ||||
| CircRNA type | exonic | Gene ID | ENSG00000166450.12 | ||||
| Gene Name | PRTG | Detection pipeline | n/a | ||||
| Sample Type | Esophageal cancer | ||||||||
| Method for Estimation | . | ||||||||
| Circular RNA status | Experimented | PCR Details | Link to the detailed experimental procedure | ||||||
| Primers (Experimented) | |||||||||
| Primers (Validated) | |||||||||
| Forward Primer | . | ||||||||
| Reverse Primer | . | ||||||||
| Aliases | hsa_circ_0035381 | Scientific name | Homo sapiens (hg19) | ||||
| Organism | Human | Genome Locus | chr15:55621921-55634000:+ | ||||
| CircRNA type | N/A | Gene ID | ENSG00000166450.12 | ||||
| Gene Name | PRTG | Detection pipeline | N/A | ||||
| Sample Type | Acute Myeloid Leukemia | ||||||||
| Method for Estimation | Microarray and Quantitative PCR | ||||||||
| Circular RNA status | Validated | PCR Details | Link to the detailed experimental procedure | ||||||
| Primers (Experimented) | |||||||||
| Primers (Validated) | |||||||||
| Forward Primer | GGTGACTGTGCTGTGGAC | ||||||||
| Reverse Primer | TGGTGTTTGTAAGGGTTC | ||||||||
| Suggested primers | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Product size | Left primer | Right primer | Left GC | Right GC | Left TM | Right TM | Left pos | Right pos | Left size | Right size | |
| 100 | ttaCAGCATGTTGAGCCACA | GTGAACCAGGAGCACAACTG | 45 | 55 | 57.731 | 59.053 | 129 | 228 | 20 | 20 | |
| 123 | GAGCCACAAAGAATTCAGGTTTA | TGGTGTTTGTAAGGGTTCTGG | 39.13 | 47.619 | 57.294 | 58.061 | 141 | 263 | 23 | 21 | |
| 100 | TGAGCCACAAAGAATTCAGGT | AGCAATACCATGTGAACCAGG | 42.857 | 47.619 | 57.772 | 58.273 | 140 | 239 | 21 | 21 | |
| 100 | ttaCAGCATGTTGAGCCACA | GTGAACCAGGAGCACAACTG | 45 | 55 | 57.731 | 59.053 | 129 | 228 | 20 | 20 | |
| 100 | TGAGCCACAAAGAATTCAGGT | AGCAATACCATGTGAACCAGG | 42.857 | 47.619 | 57.772 | 58.273 | 140 | 239 | 21 | 21 | |
| 123 | GAGCCACAAAGAATTCAGGTTTA | TGGTGTTTGTAAGGGTTCTGG | 39.13 | 47.619 | 57.294 | 58.061 | 141 | 263 | 23 | 21 | |
| 100 | ttaCAGCATGTTGAGCCACA | GTGAACCAGGAGCACAACTG | 45 | 55 | 57.731 | 59.053 | 129 | 228 | 20 | 20 | |
| 123 | GAGCCACAAAGAATTCAGGTTTA | TGGTGTTTGTAAGGGTTCTGG | 39.13 | 47.619 | 57.294 | 58.061 | 141 | 263 | 23 | 21 | |
| 100 | TGAGCCACAAAGAATTCAGGT | AGCAATACCATGTGAACCAGG | 42.857 | 47.619 | 57.772 | 58.273 | 140 | 239 | 21 | 21 | |