Aliases chr15:76566752|76588078 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr15:76566752-76588078:n/a
CircRNA type n/a Gene ID ENSG00000140374.11
Gene Name ETFA Detection pipeline n/a
Sample Type Breast cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 29221160
Aliases hsa_circ_0000638 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr15:76566752-76588078:-
CircRNA type . Gene ID ENSG00000140386.12
Gene Name SCAPER Detection pipeline .
Sample Type HEK293; cd_19; Hs68_RNase; Hs68_control; Nhek; K562; Hepg2; Helas3; H1hesc; Gm12878; Bj; Ag04450; A549; Sknshra; Mcf7
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25234927
Aliases HSA_CIRCpedia_15745 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr15:76566752-76588078
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type Liver_N12;Occipital;H1;Liver_T10;SH-SY5Y_D0_exp2;Liver_N3;H9;Liver_T13;Liver_N15;Forebrain;Liver;Liver_N13;Liver_N14;Liver_T8;Stomach;SH-SY5Y_D0_exp1;Cerebellum;Liver_T15;GM12878;Cortex;PA1;AG04450;SH-SY5Y_D2_exp1;Parietal;HepG2;Thyroid;Liver_N7;BJ;Liver_N6;SH-SY5Y_D4_exp2;Diencephalon;HUVEC;Liver_N11;Temporal;HeLa_S3;Liver_T12;Liver_N10;SH-SY5Y_D4_exp1;Heart;Liver_T7;Liver_T11;K562;A549;Lung;NHEK;Liver_T14;Liver_T6;Liver_T3;Hs68;Liver_T17;Liver_N22;Liver_T19;Liver_N18;Liver_T22;Liver_N20;Liver_N17;Liver_N19;Liver_N21;Liver_T21
Method for Estimation Ribo-;poly(A)-;RNaseR
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 30172046
Aliases chr15:76566752-76588078 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr15:76566752-76588078:n/a
CircRNA type n/a Gene ID ENSG00000140374.11
Gene Name ETFA Detection pipeline UROBORUS
Sample Type gliomas
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 26873924
Aliases hsa_circRNA_101604 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr15:76566752-76588078:-
CircRNA type exonic Gene ID ENSG00000140386.12
Gene Name SCAPER Detection pipeline n/a
Sample Type Esophageal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 27465405
Aliases circETFA Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr15:76566752-76588078:-
CircRNA type N/A Gene ID ENSG00000140386.12
Gene Name SCAPER Detection pipeline N/A
Sample Type breast cancer
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer TTTTATCTCCTCCTCTCACAGCC
Reverse Primer GTTCCAGCTACTAAGCAGGACACT
Pubmed 29221160
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
334 GGGAACAAAGCCAGCATCAA ACCCTGGTAATAGCTGAGCA 50 50 59.032 58.12 42 375 20 20
326 AAAGCCAGCATCAACAGCAG CCTGGTAATAGCTGAGCATGC 50 52.381 59.398 58.85 48 373 20 21
305 CGTCTGTCCAACTTGCATGT TACCATTACTGCAGCCACAC 50 50 58.771 57.892 18 322 20 20
342 TTTCCCGTCTGTCCAACTTG GCAAATGATTCCCTAGCACCC 50 52.381 58.038 59.317 13 354 20 21
250 CCAACTTGCATGTCATTGGGA AGCTGGAACCAAATGTGACA 47.619 45 59.106 57.637 25 274 21 20
307 CCAGCATCAACAGCAGCAC GCATGCAAATGATTCCCTAGC 57.895 47.619 59.788 57.977 52 358 19 21
251 GAACAAAGCCAGCATCAACAG GGTGAAGTGTCCTGCTTAGT 47.619 50 58.331 57.159 44 294 21 20
215 ATCAACAGCAGCACGGGAA TGGAACCAAATGTGACAAGGT 52.632 42.857 59.927 57.975 57 271 19 21
330 TCTGTCCAACTTGCATGTCAT TGATTCCCTAGCACCCATTACT 42.857 45.455 57.855 58.606 20 349 21 22
208 CAGCAGCACGGGAAGCAC GAACCAAATGTGACAAGGTGAGA 66.667 43.478 61.731 59.117 62 269 18 23
334 GGGAACAAAGCCAGCATCAA ACCCTGGTAATAGCTGAGCA 50 50 59.032 58.12 42 375 20 20
305 CGTCTGTCCAACTTGCATGT TACCATTACTGCAGCCACAC 50 50 58.771 57.892 18 322 20 20
326 AAAGCCAGCATCAACAGCAG CCTGGTAATAGCTGAGCATGC 50 52.381 59.398 58.85 48 373 20 21
250 CCAACTTGCATGTCATTGGGA AGCTGGAACCAAATGTGACA 47.619 45 59.106 57.637 25 274 21 20
342 TTTCCCGTCTGTCCAACTTG GCAAATGATTCCCTAGCACCC 50 52.381 58.038 59.317 13 354 20 21
215 ATCAACAGCAGCACGGGAA TGGAACCAAATGTGACAAGGT 52.632 42.857 59.927 57.975 57 271 19 21
251 GAACAAAGCCAGCATCAACAG GGTGAAGTGTCCTGCTTAGT 47.619 50 58.331 57.159 44 294 21 20
307 CCAGCATCAACAGCAGCAC GCATGCAAATGATTCCCTAGC 57.895 47.619 59.788 57.977 52 358 19 21
330 TCTGTCCAACTTGCATGTCAT TGATTCCCTAGCACCCATTACT 42.857 45.455 57.855 58.606 20 349 21 22
208 CAGCAGCACGGGAAGCAC GAACCAAATGTGACAAGGTGAGA 66.667 43.478 61.731 59.117 62 269 18 23
305 CGTCTGTCCAACTTGCATGT TACCATTACTGCAGCCACAC 50 50 58.771 57.892 18 322 20 20
342 TTTCCCGTCTGTCCAACTTG GCAAATGATTCCCTAGCACCC 50 52.381 58.038 59.317 13 354 20 21
251 GAACAAAGCCAGCATCAACAG GGTGAAGTGTCCTGCTTAGT 47.619 50 58.331 57.159 44 294 21 20
326 AAAGCCAGCATCAACAGCAG CCTGGTAATAGCTGAGCATGC 50 52.381 59.398 58.85 48 373 20 21
307 CCAGCATCAACAGCAGCAC GCATGCAAATGATTCCCTAGC 57.895 47.619 59.788 57.977 52 358 19 21
334 GGGAACAAAGCCAGCATCAA ACCCTGGTAATAGCTGAGCA 50 50 59.032 58.12 42 375 20 20
215 ATCAACAGCAGCACGGGAA TGGAACCAAATGTGACAAGGT 52.632 42.857 59.927 57.975 57 271 19 21
250 CCAACTTGCATGTCATTGGGA AGCTGGAACCAAATGTGACA 47.619 45 59.106 57.637 25 274 21 20
330 TCTGTCCAACTTGCATGTCAT TGATTCCCTAGCACCCATTACT 42.857 45.455 57.855 58.606 20 349 21 22
208 CAGCAGCACGGGAAGCAC GAACCAAATGTGACAAGGTGAGA 66.667 43.478 61.731 59.117 62 269 18 23
342 TTTCCCGTCTGTCCAACTTG GCAAATGATTCCCTAGCACCC 50 52.381 58.038 59.317 13 354 20 21
250 CCAACTTGCATGTCATTGGGA AGCTGGAACCAAATGTGACA 47.619 45 59.106 57.637 25 274 21 20
334 GGGAACAAAGCCAGCATCAA ACCCTGGTAATAGCTGAGCA 50 50 59.032 58.12 42 375 20 20
305 CGTCTGTCCAACTTGCATGT TACCATTACTGCAGCCACAC 50 50 58.771 57.892 18 322 20 20
326 AAAGCCAGCATCAACAGCAG CCTGGTAATAGCTGAGCATGC 50 52.381 59.398 58.85 48 373 20 21
307 CCAGCATCAACAGCAGCAC GCATGCAAATGATTCCCTAGC 57.895 47.619 59.788 57.977 52 358 19 21
251 GAACAAAGCCAGCATCAACAG GGTGAAGTGTCCTGCTTAGT 47.619 50 58.331 57.159 44 294 21 20
215 ATCAACAGCAGCACGGGAA TGGAACCAAATGTGACAAGGT 52.632 42.857 59.927 57.975 57 271 19 21
208 CAGCAGCACGGGAAGCAC GAACCAAATGTGACAAGGTGAGA 66.667 43.478 61.731 59.117 62 269 18 23
330 TCTGTCCAACTTGCATGTCAT TGATTCCCTAGCACCCATTACT 42.857 45.455 57.855 58.606 20 349 21 22