Aliases hsa_circ_0006633 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr1:59805629-59844509:+
CircRNA type . Gene ID ENSG00000134709.10
Gene Name HOOK1 Detection pipeline .
Sample Type Hs68_RNase; Hs68_control; Nhek; K562; H1hesc; Gm12878; Ag04450
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25234927
Aliases HSA_CIRCpedia_32560 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr1:59805629-59844509
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type Cortex;Diencephalon;PA1;SH-SY5Y_D8_exp2;Liver_T10;Temporal;BJ;Liver_N7;Heart;SH-SY5Y_D4_exp1;Liver_T15;Liver_N10;Liver_N13;Liver_N15;SH-SY5Y_D0_exp1;SH-SY5Y_D2_exp1;K562;Lung;Liver_T12;Parietal;Liver_T14;Liver_T6;AG04450;Liver_N6;Cerebellum;Liver_T8;H9;Liver_T13;Liver_N12;Liver_N14;Liver_T3;Liver_T11;GM12878;Liver_N3;Occipital;A549;NHEK;Stomach;Liver_N11;Liver_T7;HeLa_S3;Liver_N8;Thyroid;Liver;H1;Hs68;Liver_T20;Liver_T19;Liver_N22;Liver_N18;Liver_T17;Liver_T18;Liver_N21;Liver_T21;Liver_T22;Liver_N20;Liver_N17;Liver_N19
Method for Estimation Ribo-;RNaseR;poly(A)-
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 30172046
Aliases circ_007244 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr1:59805629-59844509:+
CircRNA type n/a Gene ID ENSG00000134709.10
Gene Name HOOK1 Detection pipeline Find_circ
Sample Type colorectal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25624062
Aliases chr1:59805629-59844509 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr1:59805629-59844509:n/a
CircRNA type n/a Gene ID ENSG00000172456.12
Gene Name FGGY Detection pipeline UROBORUS
Sample Type gliomas
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 26873924
Aliases hsa_circ_0006633 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr1:59805629-59844509:+
CircRNA type N/A Gene ID ENSG00000134709.10
Gene Name HOOK1 Detection pipeline N/A
Sample Type Gastric cancer
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer CTCCCGGACTTCTTATCGTGG
Reverse Primer CGATGGTCCAGCCACATGAT
Pubmed 28656881
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
127 ACATGGGAAGGAGCCACTTT GGTAACAGAACAAGCCCACA 50 50 59.22 58.024 166 292 20 20
115 AGTTTGGGTGTGGAGGACTG CGTTGTGGTCCGGATTATGG 55 55 59.526 58.704 125 239 20 20
166 AACAGTTTGGGTGTGGAGGA CAGAACAAGCCCACAAGAGG 50 55 59.077 58.758 122 287 20 20
109 TGGGAAGGAGCCACTTTTGT CCACAAGAGGGAGAAAGGTAC 50 52.381 59.444 57.664 169 277 20 21
111 GGACTGCACATGGGAAGGA GGGAGAAAGGTACAACTACAGC 57.895 50 59.315 58.403 159 269 19 22
158 CAGAAACAGTTTGGGTGTGGA ACAAGAGGGAGAAAGGTACAACT 47.619 43.478 58.626 59.025 118 275 21 23
101 CAATCAGAAACAGTTTGGGTGT ACCACGACTCTGCTAAATTATGG 40.909 43.478 57.346 58.557 114 214 22 23
257 GATTTGCTGGGATAAGGCGG ACCTGGGCCCATTGGATTAA 55 50 59.046 58.985 122 378 20 20
108 CCCGGACTTCTTATCGTGGA CAGAGAACACGTGGCATCAA 55 50 58.891 58.488 158 265 20 20
134 TGGGATAAGGCGGGACATTT AGAACACGTGGCATCAAACC 50 50 59.077 59.048 129 262 20 20
119 AAGGCGGGACATTTCTTTGA GGCATCAAACCCAAGTCCTC 45 55 57.714 58.823 135 253 20 20
135 GGCGGGACATTTCTTTGATCT AACAACCAGAGAACACGTGG 47.619 50 58.631 58.336 137 271 21 20
159 TCTTTGATCTCCCGGACTTCT TGGTTGACTGGTAATGGGTGA 47.619 47.619 58.179 58.941 148 306 21 21
104 ACTTGAGAGAGATTTGCTGGGA TCCCTTGTACAACTTTCGTGC 45.455 47.619 59.091 58.785 112 215 22 21
170 GGATAAGGCGGGACATTTCTT ACTGGTAATGGGTGAAACTGC 47.619 47.619 58.068 58.485 131 300 21 21
114 TCTCCCGGACTTCTTATCGT AACCAGAGAACACGTGGCAT 50 50 57.568 59.891 155 268 20 20
111 GGACATTTCTTTGATCTCCCGG CATCAAACCCAAGTCCTCGAA 50 47.619 59.054 58.222 141 251 22 21
257 GATTTGCTGGGATAAGGCGG ACCTGGGCCCATTGGATTAA 55 50 59.046 58.985 122 378 20 20
134 TGGGATAAGGCGGGACATTT AGAACACGTGGCATCAAACC 50 50 59.077 59.048 129 262 20 20
119 AAGGCGGGACATTTCTTTGA GGCATCAAACCCAAGTCCTC 45 55 57.714 58.823 135 253 20 20
108 CCCGGACTTCTTATCGTGGA CAGAGAACACGTGGCATCAA 55 50 58.891 58.488 158 265 20 20
135 GGCGGGACATTTCTTTGATCT AACAACCAGAGAACACGTGG 47.619 50 58.631 58.336 137 271 21 20
114 TCTCCCGGACTTCTTATCGT AACCAGAGAACACGTGGCAT 50 50 57.568 59.891 155 268 20 20
159 TCTTTGATCTCCCGGACTTCT TGGTTGACTGGTAATGGGTGA 47.619 47.619 58.179 58.941 148 306 21 21
104 ACTTGAGAGAGATTTGCTGGGA TCCCTTGTACAACTTTCGTGC 45.455 47.619 59.091 58.785 112 215 22 21
170 GGATAAGGCGGGACATTTCTT ACTGGTAATGGGTGAAACTGC 47.619 47.619 58.068 58.485 131 300 21 21
111 GGACATTTCTTTGATCTCCCGG CATCAAACCCAAGTCCTCGAA 50 47.619 59.054 58.222 141 251 22 21
134 TGGGATAAGGCGGGACATTT AGAACACGTGGCATCAAACC 50 50 59.077 59.048 129 262 20 20
108 CCCGGACTTCTTATCGTGGA CAGAGAACACGTGGCATCAA 55 50 58.891 58.488 158 265 20 20
257 GATTTGCTGGGATAAGGCGG ACCTGGGCCCATTGGATTAA 55 50 59.046 58.985 122 378 20 20
119 AAGGCGGGACATTTCTTTGA GGCATCAAACCCAAGTCCTC 45 55 57.714 58.823 135 253 20 20
135 GGCGGGACATTTCTTTGATCT AACAACCAGAGAACACGTGG 47.619 50 58.631 58.336 137 271 21 20
104 ACTTGAGAGAGATTTGCTGGGA TCCCTTGTACAACTTTCGTGC 45.455 47.619 59.091 58.785 112 215 22 21
159 TCTTTGATCTCCCGGACTTCT TGGTTGACTGGTAATGGGTGA 47.619 47.619 58.179 58.941 148 306 21 21
170 GGATAAGGCGGGACATTTCTT ACTGGTAATGGGTGAAACTGC 47.619 47.619 58.068 58.485 131 300 21 21
114 TCTCCCGGACTTCTTATCGT AACCAGAGAACACGTGGCAT 50 50 57.568 59.891 155 268 20 20
111 GGACATTTCTTTGATCTCCCGG CATCAAACCCAAGTCCTCGAA 50 47.619 59.054 58.222 141 251 22 21