Aliases hsa_circ_0000681 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr16:23999828-24046868:+
CircRNA type . Gene ID ENSG00000166501.8
Gene Name PRKCB Detection pipeline .
Sample Type HEK293; cd_19; neutr; K562; H1hesc; Gm12878
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases HSA_CIRCpedia_17062 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr16:23999828-24046868
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type Temporal;Liver_N11;Liver_N12;Liver;Parietal;Cerebellum;H1;GM12878;Lung;K562;Diencephalon;Cortex;Occipital;Liver_T19;Liver_T17;Liver_N17
Method for Estimation Ribo-;poly(A)-
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases circ_005447 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr16:23999828-24046868:+
CircRNA type n/a Gene ID ENSG00000166501.8
Gene Name PRKCB Detection pipeline Find_circ
Sample Type colorectal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases hsa_circRNA_101762 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr16:23999828-24046868:+
CircRNA type exonic Gene ID ENSG00000166501.8
Gene Name PRKCB Detection pipeline n/a
Sample Type Esophageal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases hsa_circ_0000681 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr16:23999828-24046868:+
CircRNA type N/A Gene ID ENSG00000166501.8
Gene Name PRKCB Detection pipeline N/A
Sample Type Pulmonary tuberculosis
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer GATGAATGTTCCCAGCCTGT
Reverse Primer AGGGCAGGAGAATGTGACAA
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
107 ACGTCCTCATTGTCCTCGTT ACTTACATCGGAGGCTGGAC 50 55 59.033 59.175 182 288 20 20
110 CGTGATGAATGTTCCCAGCC AGCAGCAAACGAGGACAATG 55 50 59.265 59.123 99 208 20 20
101 TCTACATCCAGGCCCACATC AGGGCAGGAGAATGTGACAA 55 50 58.868 58.933 155 255 20 20
143 CATTGTCCTCGTTTGCTGCT GGCAGCATTGACTGTGGAC 50 57.895 59.123 59.121 189 331 20 19
133 GAATGTTCCCAGCCTGTGTG AAATTCATGGCACCGCTTGT 55 45 59.116 59.032 105 237 20 20
172 AAGCCACATCCCCTCTCTCT ACAAAGCAGCAAACGAGGAC 55 50 59.956 59.337 41 212 20 20
139 GATGAATGTTCCCAGCCTGT GACAAATTCATGGCACCGCT 50 50 57.865 59.472 102 240 20 20
102 GTCCTCGTTTGCTGCTTTGT CCCATTACTTACATCGGAGGC 50 52.381 59.337 58.232 193 294 20 21
171 CACATCCCCTCTCTCTGCC ACCACAAAGCAGCAAACGAG 63.158 50 59.171 59.618 45 215 19 20
106 GCATCTACATCCAGGCCCA CCAGGGCAGGAGAATGTGA 57.895 57.895 59.161 59.006 152 257 19 19
134 TCCTCATTGTCCTCGTTTGC GTGGACAGAGAAAAGCAATCGA 50 45.455 58.192 58.933 185 318 20 22
156 CCCTCACAGCCTGCATGAT GCACCACAAAGCAGCAAAC 57.895 52.632 59.773 58.699 62 217 19 19
133 GAATGTTCCCAGCCTGTGTG AAATTCATGGCACCGCTTGT 55 45 59.116 59.032 105 237 20 20
107 ACGTCCTCATTGTCCTCGTT ACTTACATCGGAGGCTGGAC 50 55 59.033 59.175 182 288 20 20
101 TCTACATCCAGGCCCACATC AGGGCAGGAGAATGTGACAA 55 50 58.868 58.933 155 255 20 20
110 CGTGATGAATGTTCCCAGCC AGCAGCAAACGAGGACAATG 55 50 59.265 59.123 99 208 20 20
143 CATTGTCCTCGTTTGCTGCT GGCAGCATTGACTGTGGAC 50 57.895 59.123 59.121 189 331 20 19
172 AAGCCACATCCCCTCTCTCT ACAAAGCAGCAAACGAGGAC 55 50 59.956 59.337 41 212 20 20
139 GATGAATGTTCCCAGCCTGT GACAAATTCATGGCACCGCT 50 50 57.865 59.472 102 240 20 20
102 GTCCTCGTTTGCTGCTTTGT CCCATTACTTACATCGGAGGC 50 52.381 59.337 58.232 193 294 20 21
171 CACATCCCCTCTCTCTGCC ACCACAAAGCAGCAAACGAG 63.158 50 59.171 59.618 45 215 19 20
106 GCATCTACATCCAGGCCCA CCAGGGCAGGAGAATGTGA 57.895 57.895 59.161 59.006 152 257 19 19
156 CCCTCACAGCCTGCATGAT GCACCACAAAGCAGCAAAC 57.895 52.632 59.773 58.699 62 217 19 19
134 TCCTCATTGTCCTCGTTTGC GTGGACAGAGAAAAGCAATCGA 50 45.455 58.192 58.933 185 318 20 22
133 GAATGTTCCCAGCCTGTGTG AAATTCATGGCACCGCTTGT 55 45 59.116 59.032 105 237 20 20
107 ACGTCCTCATTGTCCTCGTT ACTTACATCGGAGGCTGGAC 50 55 59.033 59.175 182 288 20 20
110 CGTGATGAATGTTCCCAGCC AGCAGCAAACGAGGACAATG 55 50 59.265 59.123 99 208 20 20
143 CATTGTCCTCGTTTGCTGCT GGCAGCATTGACTGTGGAC 50 57.895 59.123 59.121 189 331 20 19
171 CACATCCCCTCTCTCTGCC ACCACAAAGCAGCAAACGAG 63.158 50 59.171 59.618 45 215 19 20
139 GATGAATGTTCCCAGCCTGT GACAAATTCATGGCACCGCT 50 50 57.865 59.472 102 240 20 20
106 GCATCTACATCCAGGCCCA CCAGGGCAGGAGAATGTGA 57.895 57.895 59.161 59.006 152 257 19 19
172 AAGCCACATCCCCTCTCTCT ACAAAGCAGCAAACGAGGAC 55 50 59.956 59.337 41 212 20 20
101 TCTACATCCAGGCCCACATC AGGGCAGGAGAATGTGACAA 55 50 58.868 58.933 155 255 20 20
134 TCCTCATTGTCCTCGTTTGC GTGGACAGAGAAAAGCAATCGA 50 45.455 58.192 58.933 185 318 20 22
156 CCCTCACAGCCTGCATGAT GCACCACAAAGCAGCAAAC 57.895 52.632 59.773 58.699 62 217 19 19
102 GTCCTCGTTTGCTGCTTTGT CCCATTACTTACATCGGAGGC 50 52.381 59.337 58.232 193 294 20 21
133 GAATGTTCCCAGCCTGTGTG AAATTCATGGCACCGCTTGT 55 45 59.116 59.032 105 237 20 20
101 TCTACATCCAGGCCCACATC AGGGCAGGAGAATGTGACAA 55 50 58.868 58.933 155 255 20 20
107 ACGTCCTCATTGTCCTCGTT ACTTACATCGGAGGCTGGAC 50 55 59.033 59.175 182 288 20 20
110 CGTGATGAATGTTCCCAGCC AGCAGCAAACGAGGACAATG 55 50 59.265 59.123 99 208 20 20
172 AAGCCACATCCCCTCTCTCT ACAAAGCAGCAAACGAGGAC 55 50 59.956 59.337 41 212 20 20
143 CATTGTCCTCGTTTGCTGCT GGCAGCATTGACTGTGGAC 50 57.895 59.123 59.121 189 331 20 19
171 CACATCCCCTCTCTCTGCC ACCACAAAGCAGCAAACGAG 63.158 50 59.171 59.618 45 215 19 20
102 GTCCTCGTTTGCTGCTTTGT CCCATTACTTACATCGGAGGC 50 52.381 59.337 58.232 193 294 20 21
139 GATGAATGTTCCCAGCCTGT GACAAATTCATGGCACCGCT 50 50 57.865 59.472 102 240 20 20
106 GCATCTACATCCAGGCCCA CCAGGGCAGGAGAATGTGA 57.895 57.895 59.161 59.006 152 257 19 19
156 CCCTCACAGCCTGCATGAT GCACCACAAAGCAGCAAAC 57.895 52.632 59.773 58.699 62 217 19 19
134 TCCTCATTGTCCTCGTTTGC GTGGACAGAGAAAAGCAATCGA 50 45.455 58.192 58.933 185 318 20 22