Aliases hsa_circ_0040705 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr16:84792321-84801964:+
CircRNA type . Gene ID ENSG00000103194.11
Gene Name USP10 Detection pipeline .
Sample Type K562; Mcf7
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25234927
Aliases HSA_CIRCpedia_18939 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr16:84792321-84801964
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type Liver;Liver_N10;Kidney;Parietal;K562;Liver_T12;Temporal;GM12878;Cortex;Liver_N15;Cerebellum;Diencephalon;H1;Heart;PA1;Liver_N14;Thyroid;Liver_T7;Liver_T14;Liver_N12;SH-SY5Y_D0_exp1;Hs68;Liver_N20;Liver_N19;Liver_N17;Liver_T19;Liver_T21
Method for Estimation Ribo-;poly(A)-;RNaseR
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 30172046
Aliases hsa_circRNA_101889 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr16:84792321-84801964:+
CircRNA type exonic Gene ID ENSG00000103194.11
Gene Name USP10 Detection pipeline n/a
Sample Type Esophageal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 27465405
Aliases hsa_circ_101889/hsa_circ_0040705 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr16:84792321-84801964:+
CircRNA type N/A Gene ID ENSG00000103194.11
Gene Name USP10 Detection pipeline N/A
Sample Type Systemic Lupus Erythematosus
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer ACAAGATACGCACAGTCCAGGAT
Reverse Primer TGTAGCACCAGTTCCCTTTATTGA
Pubmed 29360436
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
250 AAGATACGCACAGTCCAGGA AGCTAAGTCACATGCACCCA 50 50 58.443 59.308 116 365 20 20
137 AGACAAGATACGCACAGTCCA GGTTGCAACGACACTGGTTT 47.619 50 59.107 59.546 112 248 21 20
219 GGTGGCAAGAGAATCTGTCC GCTGAGCTAAGTCACATGCA 55 50 58.256 58.269 151 369 20 20
165 TCCAGTCAGACAAGATACGCA CCTTTATTGATCAGCCCACGG 47.619 52.381 58.832 59.05 105 269 21 21
134 TCACGTTGCAGTTGGATATCC GGGTTACATTCTCCAGCAACTC 47.619 50 58.372 58.99 87 220 21 22
189 GGCAAGAGAATCTGTCCAAGG GAGGGACAGCTGCAACAAG 52.381 57.895 58.636 58.748 154 342 21 19
127 ATACGCACAGTCCAGGATGC TGCAACGACACTGGTTTATGG 55 47.619 60.179 59.123 119 245 20 21
141 GTCAGACAAGATACGCACAGT GGGTTGCAACGACACTGG 47.619 61.111 58.052 58.969 109 249 21 18
135 ACTGGAGAGCTTGGTGGC GTTCCCTTTATTGATCAGCCCA 61.111 45.455 59.247 58.369 139 273 18 22
163 GCACAGTCCAGGATGCACT AATGTAGCACCAGTTCCCTTT 57.895 42.857 60.003 57.474 123 285 19 21
100 CAAGAGAGTTGCTGGAGAATGT ACAGCATTAATGTAGCACCAGT 45.455 40.909 58.327 58.045 194 293 22 22
250 AAGATACGCACAGTCCAGGA AGCTAAGTCACATGCACCCA 50 50 58.443 59.308 116 365 20 20
219 GGTGGCAAGAGAATCTGTCC GCTGAGCTAAGTCACATGCA 55 50 58.256 58.269 151 369 20 20
137 AGACAAGATACGCACAGTCCA GGTTGCAACGACACTGGTTT 47.619 50 59.107 59.546 112 248 21 20
165 TCCAGTCAGACAAGATACGCA CCTTTATTGATCAGCCCACGG 47.619 52.381 58.832 59.05 105 269 21 21
189 GGCAAGAGAATCTGTCCAAGG GAGGGACAGCTGCAACAAG 52.381 57.895 58.636 58.748 154 342 21 19
134 TCACGTTGCAGTTGGATATCC GGGTTACATTCTCCAGCAACTC 47.619 50 58.372 58.99 87 220 21 22
127 ATACGCACAGTCCAGGATGC TGCAACGACACTGGTTTATGG 55 47.619 60.179 59.123 119 245 20 21
141 GTCAGACAAGATACGCACAGT GGGTTGCAACGACACTGG 47.619 61.111 58.052 58.969 109 249 21 18
100 CAAGAGAGTTGCTGGAGAATGT ACAGCATTAATGTAGCACCAGT 45.455 40.909 58.327 58.045 194 293 22 22
135 ACTGGAGAGCTTGGTGGC GTTCCCTTTATTGATCAGCCCA 61.111 45.455 59.247 58.369 139 273 18 22
163 GCACAGTCCAGGATGCACT AATGTAGCACCAGTTCCCTTT 57.895 42.857 60.003 57.474 123 285 19 21
250 AAGATACGCACAGTCCAGGA AGCTAAGTCACATGCACCCA 50 50 58.443 59.308 116 365 20 20
219 GGTGGCAAGAGAATCTGTCC GCTGAGCTAAGTCACATGCA 55 50 58.256 58.269 151 369 20 20
137 AGACAAGATACGCACAGTCCA GGTTGCAACGACACTGGTTT 47.619 50 59.107 59.546 112 248 21 20
165 TCCAGTCAGACAAGATACGCA CCTTTATTGATCAGCCCACGG 47.619 52.381 58.832 59.05 105 269 21 21
127 ATACGCACAGTCCAGGATGC TGCAACGACACTGGTTTATGG 55 47.619 60.179 59.123 119 245 20 21
134 TCACGTTGCAGTTGGATATCC GGGTTACATTCTCCAGCAACTC 47.619 50 58.372 58.99 87 220 21 22
189 GGCAAGAGAATCTGTCCAAGG GAGGGACAGCTGCAACAAG 52.381 57.895 58.636 58.748 154 342 21 19
141 GTCAGACAAGATACGCACAGT GGGTTGCAACGACACTGG 47.619 61.111 58.052 58.969 109 249 21 18
163 GCACAGTCCAGGATGCACT AATGTAGCACCAGTTCCCTTT 57.895 42.857 60.003 57.474 123 285 19 21
135 ACTGGAGAGCTTGGTGGC GTTCCCTTTATTGATCAGCCCA 61.111 45.455 59.247 58.369 139 273 18 22
100 CAAGAGAGTTGCTGGAGAATGT ACAGCATTAATGTAGCACCAGT 45.455 40.909 58.327 58.045 194 293 22 22
250 AAGATACGCACAGTCCAGGA AGCTAAGTCACATGCACCCA 50 50 58.443 59.308 116 365 20 20
219 GGTGGCAAGAGAATCTGTCC GCTGAGCTAAGTCACATGCA 55 50 58.256 58.269 151 369 20 20
137 AGACAAGATACGCACAGTCCA GGTTGCAACGACACTGGTTT 47.619 50 59.107 59.546 112 248 21 20
165 TCCAGTCAGACAAGATACGCA CCTTTATTGATCAGCCCACGG 47.619 52.381 58.832 59.05 105 269 21 21
127 ATACGCACAGTCCAGGATGC TGCAACGACACTGGTTTATGG 55 47.619 60.179 59.123 119 245 20 21
189 GGCAAGAGAATCTGTCCAAGG GAGGGACAGCTGCAACAAG 52.381 57.895 58.636 58.748 154 342 21 19
134 TCACGTTGCAGTTGGATATCC GGGTTACATTCTCCAGCAACTC 47.619 50 58.372 58.99 87 220 21 22
141 GTCAGACAAGATACGCACAGT GGGTTGCAACGACACTGG 47.619 61.111 58.052 58.969 109 249 21 18
135 ACTGGAGAGCTTGGTGGC GTTCCCTTTATTGATCAGCCCA 61.111 45.455 59.247 58.369 139 273 18 22
100 CAAGAGAGTTGCTGGAGAATGT ACAGCATTAATGTAGCACCAGT 45.455 40.909 58.327 58.045 194 293 22 22
163 GCACAGTCCAGGATGCACT AATGTAGCACCAGTTCCCTTT 57.895 42.857 60.003 57.474 123 285 19 21