Aliases hsa_circ_0000745 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr17:20107645-20109225:+
CircRNA type . Gene ID ENSG00000128487.16
Gene Name SPECC1 Detection pipeline .
Sample Type HEK293; Nhek; K562; Huvec; Hepg2; Helas3; H1hesc; Gm12878; Bj; Ag04450; A549; Sknshra; Mcf7
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25234927
Aliases HSA_CIRCpedia_19689 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr17:20107645-20109225
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type PA1;Liver_T6;Liver_T3;GM12878;SH-SY5Y_D0_exp2;Liver_T15;Liver_T7;SH-SY5Y_D8_exp2;SH-SY5Y_D4_exp1;SH-SY5Y_D4_exp2;Stomach;HeLa_S3;Lung;H9;Liver_T14;Diencephalon;K562;SH-SY5Y_D0_exp1;BJ;Liver_N6;Liver_N15;Parietal;Liver_N11;Thyroid;HepG2;Liver;SK_N_SH;Cortex;Liver_N14;Occipital;Liver_T11;Liver_N8;HUVEC;Liver_N10;A549;AG04450;SH-SY5Y_D2_exp1;Temporal;Liver_T10;Liver_N3;Forebrain;Liver_T12;Liver_N7;Cerebellum;Liver_T13;Kidney;H1;Liver_N12;Liver_N13;NHEK;Liver_T8;Hs68;Liver_T21;Liver_N18;Liver_T19;Liver_T17;Liver_N22;Liver_T22;Liver_T18;Liver_N19;Liver_N17;Liver_N20;Liver_N21
Method for Estimation Ribo-;poly(A)-;RNaseR
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 30172046
Aliases circ_008716 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr17:20107645-20109225:+
CircRNA type n/a Gene ID ENSG00000128487.16
Gene Name SPECC1 Detection pipeline Find_circ
Sample Type colorectal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25624062
Aliases chr17:20107645-20109225 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr17:20107645-20109225:n/a
CircRNA type n/a Gene ID ENSG00000263494.1;ENSG00000128487.12
Gene Name AC004702.2;SPECC1 Detection pipeline UROBORUS
Sample Type gliomas
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 26873924
Aliases hsa_circRNA_101996 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr17:20107645-20109225:+
CircRNA type exonic Gene ID ENSG00000128487.16
Gene Name SPECC1 Detection pipeline n/a
Sample Type Esophageal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 27465405
Aliases hsa_circ_0000745 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr17:20107645-20109225:+
CircRNA type N/A Gene ID ENSG00000128487.16
Gene Name SPECC1 Detection pipeline N/A
Sample Type Gastric cancer
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer GTTGAAAGTAGCCCGAGCAG
Reverse Primer ACGTGGCACAGACCTCTCTC
Pubmed 28974900
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
347 GCAGGGTGAGAAGCAGAAAG AGGTGTTTCGTAGGAGTGGG 55 55 58.836 59.026 10 356 20 20
279 TCATTTGCAGGGTGAGAAGC TGGCACAGACCTCTCTCTTG 50 55 58.462 59.028 4 282 20 20
251 AGCTGCGAAGTTCAAGAAATGT GGACACTGATTTCCTGGGGT 40.909 55 59.119 59.301 65 315 22 20
283 GAGAGCTGCGAAGTTCAAGA GGAGTGGGAGTGTTGGAAGA 50 55 57.928 58.943 62 344 20 20
176 AGGCAAACGGTGAAATTAAACA TGGAAGAAGTTGGACTGGACA 36.364 47.619 57.343 58.876 156 331 22 21
194 GAATTACTAAAGGCAAACGGTGA GGGAGTGTTGGAAGAAGTTGG 39.13 52.381 57.384 58.769 146 339 23 21
192 ACTAAAGGCAAACGGTGAAATT AGTGGGAGTGTTGGAAGAAGT 36.364 47.619 57.07 58.872 151 342 22 21
170 GCAAACGGTGAAATTAAACATGT AGAAGTTGGACTGGACACTGA 34.783 47.619 57.101 58.601 158 327 23 21
150 AGAAATGTTGAAAGTAGCCCGAG GCCTGTCCGTTTAGTTGTTGT 43.478 47.619 58.996 59.055 79 228 23 21
347 GCAGGGTGAGAAGCAGAAAG AGGTGTTTCGTAGGAGTGGG 55 55 58.836 59.026 10 356 20 20
279 TCATTTGCAGGGTGAGAAGC TGGCACAGACCTCTCTCTTG 50 55 58.462 59.028 4 282 20 20
251 AGCTGCGAAGTTCAAGAAATGT GGACACTGATTTCCTGGGGT 40.909 55 59.119 59.301 65 315 22 20
283 GAGAGCTGCGAAGTTCAAGA GGAGTGGGAGTGTTGGAAGA 50 55 57.928 58.943 62 344 20 20
150 AGAAATGTTGAAAGTAGCCCGAG GCCTGTCCGTTTAGTTGTTGT 43.478 47.619 58.996 59.055 79 228 23 21
176 AGGCAAACGGTGAAATTAAACA TGGAAGAAGTTGGACTGGACA 36.364 47.619 57.343 58.876 156 331 22 21
194 GAATTACTAAAGGCAAACGGTGA GGGAGTGTTGGAAGAAGTTGG 39.13 52.381 57.384 58.769 146 339 23 21
192 ACTAAAGGCAAACGGTGAAATT AGTGGGAGTGTTGGAAGAAGT 36.364 47.619 57.07 58.872 151 342 22 21
170 GCAAACGGTGAAATTAAACATGT AGAAGTTGGACTGGACACTGA 34.783 47.619 57.101 58.601 158 327 23 21
347 GCAGGGTGAGAAGCAGAAAG AGGTGTTTCGTAGGAGTGGG 55 55 58.836 59.026 10 356 20 20
279 TCATTTGCAGGGTGAGAAGC TGGCACAGACCTCTCTCTTG 50 55 58.462 59.028 4 282 20 20
283 GAGAGCTGCGAAGTTCAAGA GGAGTGGGAGTGTTGGAAGA 50 55 57.928 58.943 62 344 20 20
251 AGCTGCGAAGTTCAAGAAATGT GGACACTGATTTCCTGGGGT 40.909 55 59.119 59.301 65 315 22 20
150 AGAAATGTTGAAAGTAGCCCGAG GCCTGTCCGTTTAGTTGTTGT 43.478 47.619 58.996 59.055 79 228 23 21
176 AGGCAAACGGTGAAATTAAACA TGGAAGAAGTTGGACTGGACA 36.364 47.619 57.343 58.876 156 331 22 21
192 ACTAAAGGCAAACGGTGAAATT AGTGGGAGTGTTGGAAGAAGT 36.364 47.619 57.07 58.872 151 342 22 21
194 GAATTACTAAAGGCAAACGGTGA GGGAGTGTTGGAAGAAGTTGG 39.13 52.381 57.384 58.769 146 339 23 21
170 GCAAACGGTGAAATTAAACATGT AGAAGTTGGACTGGACACTGA 34.783 47.619 57.101 58.601 158 327 23 21
347 GCAGGGTGAGAAGCAGAAAG AGGTGTTTCGTAGGAGTGGG 55 55 58.836 59.026 10 356 20 20
279 TCATTTGCAGGGTGAGAAGC TGGCACAGACCTCTCTCTTG 50 55 58.462 59.028 4 282 20 20
283 GAGAGCTGCGAAGTTCAAGA GGAGTGGGAGTGTTGGAAGA 50 55 57.928 58.943 62 344 20 20
251 AGCTGCGAAGTTCAAGAAATGT GGACACTGATTTCCTGGGGT 40.909 55 59.119 59.301 65 315 22 20
150 AGAAATGTTGAAAGTAGCCCGAG GCCTGTCCGTTTAGTTGTTGT 43.478 47.619 58.996 59.055 79 228 23 21
192 ACTAAAGGCAAACGGTGAAATT AGTGGGAGTGTTGGAAGAAGT 36.364 47.619 57.07 58.872 151 342 22 21
176 AGGCAAACGGTGAAATTAAACA TGGAAGAAGTTGGACTGGACA 36.364 47.619 57.343 58.876 156 331 22 21
194 GAATTACTAAAGGCAAACGGTGA GGGAGTGTTGGAAGAAGTTGG 39.13 52.381 57.384 58.769 146 339 23 21
170 GCAAACGGTGAAATTAAACATGT AGAAGTTGGACTGGACACTGA 34.783 47.619 57.101 58.601 158 327 23 21