Aliases hsa_circ_0046701 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr18:745707-751804:-
CircRNA type . Gene ID ENSG00000176105.9;ENST00000577961.5
Gene Name YES1;YES1 Detection pipeline .
Sample Type K562
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25234927
Aliases HSA_CIRCpedia_131960 Scientific name Homo sapiens (hg38)
Organism Human Genome Locus chr18:745707-751804
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type PA1;Liver_T8;Liver_N8
Method for Estimation Ribo-
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 30172046
Aliases HSA_CIRCpedia_131960 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr18:745707-751804
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type K562
Method for Estimation poly(A)-
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 30172046
Aliases hsa_circ_0046701 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr18:745707-751804:-
CircRNA type N/A Gene ID ENSG00000176105.9;ENST00000577961.5
Gene Name YES1;YES1 Detection pipeline N/A
Sample Type Gliomas
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer CACAACCAGAGCACAATTTGA
Reverse Primer TGGATCATCAACCAGCTCAG
Pubmed 29337055
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
144 AAGGGAATAAGCACCTGGGT CCAGATCCAGGCTTCCAGAA 50 55 58.617 59.085 136 279 20 20
100 TCTCAAAATACTGCCCCGACA ATTCCAGATCCAGGCTTCCA 47.619 50 59.374 58.4 183 282 21 20
114 GTCACCCCTTATCTCATCCCA ACTTCCTGGTTGATGTCGGG 52.381 55 58.591 59.675 103 216 21 20
118 TGTTTCACATTGTCACCCCT GGTTGATGTCGGGGCAGTAT 45 55 57.254 59.82 92 209 20 20
157 ATACTGCCCCGACATCAACC GAACATACTTCTCTGGCTTGGG 55 50 59.82 58.726 190 346 20 22
114 CAAAATACTGCCCCGACATCA GCTTTACCTGGTGAATGATTCCA 47.619 43.478 58.635 58.984 186 299 21 23
101 ACCCCTTATCTCATCCCAATCA TGATGTCGGGGCAGTATTTT 45.455 45 58.32 57.201 106 206 22 20
102 CCTTATCTCATCCCAATCACGA TGGTTGATGTCGGGGCAG 45.455 61.111 57.393 59.649 109 210 22 18
146 TCTTTCTCAAAATACTGCCCCG CCCTTGGGACGGCAGACT 45.455 66.667 58.656 61.322 179 324 22 18
337 ACCCAGGTGCTTATTCCCTT TCATCAACCAGCTCAGTGGT 50 50 58.617 58.941 44 380 20 20
295 GGGATGAGATAAGGGGTGACA AGCTCAGTGGTTCCTGTGTA 52.381 50 58.591 58.283 77 371 21 20
288 AGGGGTGACAATGTGAAACA AACCAGCTCAGTGGTTCCTG 45 55 57.254 59.891 88 375 20 20
239 TCACAACCAGAGCACAATTTGA TGGATCATCAACCAGCTCAGT 40.909 47.619 58.714 59.089 146 384 22 21
295 CGTGATTGGGATGAGATAAGGG TGGTTCCTGTGTAAAGACCAGA 50 45.455 58.332 58.957 70 364 22 22
295 GATTGGGATGAGATAAGGGGTG CAGTGGTTCCTGTGTAAAGACC 50 50 57.974 58.861 73 367 22 22
202 ACTCTGCAGAAATTGGTGAAACA GCTCAGTGGTTCCTGTGTAAAG 39.13 50 59.046 59.191 169 370 23 22
321 TGAGATAAGGGGTGACAATGTGA CCTACCTCTCTCATCTCTGGA 43.478 52.381 59.156 57.126 81 401 23 21
321 GGATGAGATAAGGGGTGACAATG ACCTCTCTCATCTCTGGATCA 47.826 47.619 58.607 57.031 78 398 23 21
242 AGCACAATTTGATACTCTGCAGA CCTCTCTCATCTCTGGATCATCA 39.13 47.826 58.417 58.591 156 397 23 23
230 TGATACTCTGCAGAAATTGGTGA CTCTCATCTCTGGATCATCAACC 39.13 47.826 57.835 58.115 165 394 23 23
106 GGAAACTTGACAATGGTGGATAC AGGCCACAAATATAGTAACACCA 43.478 39.13 57.689 57.555 119 224 23 23
107 ACCAGAGCACAATTTGATACTCT GGTCTTCTGTAGTTCTAGCTTCA 39.13 43.478 57.829 57.353 151 257 23 23
213 ACAACCAGAGCACAATTTGATAC TCCTGTGTAAAGACCAGATTTCT 39.13 39.13 57.623 57.174 148 360 23 23
104 AAGGGAATAAGCACCTGGGT ACCACTGAGCTGGTTGATGA 50 50 58.617 58.941 136 239 20 20
134 GTCACCCCTTATCTCATCCCA ACTGAGCTGGTTGATGATCCA 52.381 47.619 58.591 59.089 103 236 21 21
197 TCCACCATTGTCAAGTTTCCT TCTGGTCTTTACACAGGAACCA 42.857 45.455 57.407 58.957 61 257 21 22
126 TGTTTCACATTGTCACCCCT CAGAGATGAGAGAGGTAGGGG 45 57.143 57.254 58.125 92 217 20 21
136 CCCTTATCTCATCCCAATCACG AGGAACCACTGAGCTGGT 50 55.556 58.332 57.679 108 243 22 18
158 CACCCCTTATCTCATCCCAATC AGAAATCTGGTCTTTACACAGGA 50 39.13 57.974 57.174 105 262 22 23