Aliases hsa_circ_0006427 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr1:94032835-94033408:-
CircRNA type . Gene ID ENSG00000137936.12
Gene Name BCAR3 Detection pipeline .
Sample Type Hs68_RNase; Hs68_control; Nhek; K562; Huvec; Hepg2; H1hesc; Gm12878; Bj; Ag04450; A549
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases HSA_CIRCpedia_33225 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr1:94032835-94033408
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type Liver_T12;H9;Liver_T6;GM12878;A549;Liver_N14;Liver_T11;HUVEC;Occipital;Liver_T13;Liver_T14;HeLa_S3;Kidney;Liver_N15;Temporal;HepG2;Liver;Liver_N3;AG04450;H1;Thyroid;NHEK;BJ;Liver_N6;Liver_N12;Diencephalon;Liver_N7;Cortex;Liver_T7;PA1;Liver_N10;Liver_T8;Liver_N11;Liver_T15;K562;Liver_N8;Cerebellum;Parietal;Liver_N13;Hs68;Liver_T20;Liver_T18;Liver_N21;Liver_N19;Liver_N18;Liver_N17;Liver_T17;Liver_T21;Liver_N20;Liver_N22
Method for Estimation Ribo-;RNaseR;poly(A)-
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases hsa_circRNA_100281 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr1:94032835-94033408:-
CircRNA type exonic Gene ID ENSG00000137936.12
Gene Name BCAR3 Detection pipeline n/a
Sample Type Esophageal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases hsa_circ_0006427 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr1:94032835-94033408:-
CircRNA type N/A Gene ID ENSG00000137936.12
Gene Name BCAR3 Detection pipeline N/A
Sample Type Primary Great Saphenous Vein Varicosities
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer ACCCCCGAGAAACTGAAGAAG
Reverse Primer TTGAAGTGCTGAGCGAGGTT
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
177 CTGACTCGTGCCCTGTCTTA GCATGTTATGAGGCCCTGAG 55 55 59.111 58.398 47 223 20 20
223 GGGTCAGGGTCACTACTCAC ACACCCAAACTGCCATTCTC 60 50 59.104 58.379 134 356 20 20
195 GCCCTGTCTTATTCTGCCAC CTGGGGAGTGGAGTACAAGT 55 55 58.616 58.354 56 250 20 20
211 CGGTCATAGTGTTTGTGGCA AAAAGACGTGGACTGCTCTG 50 50 58.482 58.129 176 386 20 20
138 TGCCATCTTTGTTTCGGTCA ATGAAGGCAGAGGTGAGCAC 45 55 58.026 60.036 162 299 20 20
216 AACGGGGAGAGGTATGCAC GCCCTTCAGCAAACTCCTG 57.895 57.895 59.094 58.739 104 319 19 19
120 GGGAGAGGTATGCACACGT CAGGGCATGTTATGAGGCC 57.895 57.895 59.102 58.275 108 227 19 19
253 GACTCGTGCCCTGTCTTATTC GCATGAAGGCAGAGGTGAG 52.381 57.895 58.458 58.222 49 301 21 19
121 TGTTGCCATCTTTGTTTCGG GTGGGCAGAGCAAGCATG 45 61.111 57.209 59.117 159 279 20 18
117 GTCAGGGTCACTACTCACATCT CGCTGGGGAGTGGAGTAC 50 66.667 58.907 59.107 136 252 22 18
109 GCGCTCCATTAACGTCACAA CTGGGGAGTGGAGTACAAGT 50 55 59.206 58.354 142 250 20 20
154 TCCATTAACGTCACAAGCGG ATGAAGGCAGAGGTGAGCAC 50 55 58.565 60.036 146 299 20 20
100 TTCAAAAGTCACAGCCTGGC GCATGTTATGAGGCCCTGAG 50 55 58.968 58.398 124 223 20 20
110 TTCCCACATGTCGGTTCCTT TGAGGCCCTGAGTTATTCCC 50 55 59.231 58.787 106 215 20 20
207 TTAACGTCACAAGCGGCATC ACACCCAAACTGCCATTCTC 50 50 59.206 58.379 150 356 20 20
211 CCACATGTCGGTTCCTTCAA GCCCTTCAGCAAACTCCTG 50 57.895 58.109 58.739 109 319 20 19
156 GGTTCAGCATGATTTCACAGC CAGGGCATGTTATGAGGCC 47.619 57.895 58.128 58.275 72 227 21 19
126 GGGACTGATACATTGTTTGGGG GCATGAAGGCAGAGGTGAG 50 57.895 58.976 58.222 176 301 22 19
100 TTCAAAAGTCACAGCCTGGC GCATGTTATGAGGCCCTGAG 50 55 58.968 58.398 124 223 20 20
110 TTCCCACATGTCGGTTCCTT TGAGGCCCTGAGTTATTCCC 50 55 59.231 58.787 106 215 20 20
207 TTAACGTCACAAGCGGCATC ACACCCAAACTGCCATTCTC 50 50 59.206 58.379 150 356 20 20
109 GCGCTCCATTAACGTCACAA CTGGGGAGTGGAGTACAAGT 50 55 59.206 58.354 142 250 20 20
154 TCCATTAACGTCACAAGCGG ATGAAGGCAGAGGTGAGCAC 50 55 58.565 60.036 146 299 20 20
211 CCACATGTCGGTTCCTTCAA GCCCTTCAGCAAACTCCTG 50 57.895 58.109 58.739 109 319 20 19
126 GGGACTGATACATTGTTTGGGG GCATGAAGGCAGAGGTGAG 50 57.895 58.976 58.222 176 301 22 19
156 GGTTCAGCATGATTTCACAGC CAGGGCATGTTATGAGGCC 47.619 57.895 58.128 58.275 72 227 21 19
110 TTCCCACATGTCGGTTCCTT TGAGGCCCTGAGTTATTCCC 50 55 59.231 58.787 106 215 20 20
100 TTCAAAAGTCACAGCCTGGC GCATGTTATGAGGCCCTGAG 50 55 58.968 58.398 124 223 20 20
207 TTAACGTCACAAGCGGCATC ACACCCAAACTGCCATTCTC 50 50 59.206 58.379 150 356 20 20
109 GCGCTCCATTAACGTCACAA CTGGGGAGTGGAGTACAAGT 50 55 59.206 58.354 142 250 20 20
154 TCCATTAACGTCACAAGCGG ATGAAGGCAGAGGTGAGCAC 50 55 58.565 60.036 146 299 20 20
211 CCACATGTCGGTTCCTTCAA GCCCTTCAGCAAACTCCTG 50 57.895 58.109 58.739 109 319 20 19
126 GGGACTGATACATTGTTTGGGG GCATGAAGGCAGAGGTGAG 50 57.895 58.976 58.222 176 301 22 19
156 GGTTCAGCATGATTTCACAGC CAGGGCATGTTATGAGGCC 47.619 57.895 58.128 58.275 72 227 21 19