Aliases hsa_circ_0002271 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr2:20974569-20990158:-
CircRNA type . Gene ID ENSG00000118961.10
Gene Name C2orf43 Detection pipeline .
Sample Type Hs68_RNase; Hs68_control; K562; Huvec; Hepg2; Helas3; H1hesc; Bj; Ag04450; A549; Sknshra
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25234927
Aliases HSA_CIRCpedia_39482 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr2:20974569-20990158
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type Liver;Liver_T10;Liver_T8;PA1;HUVEC;H1;Liver_T6;Liver_N13;SH-SY5Y_D2_exp1;HeLa_S3;Cortex;Liver_N8;BJ;Forebrain;HepG2;Occipital;AG04450;Liver_N12;Temporal;A549;Diencephalon;Liver_T12;Liver_N3;K562;Hs68;Liver_N18;Liver_N17
Method for Estimation Ribo-;RNaseR;poly(A)-
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 30172046
Aliases hsa_circRNA_002271/hsa_circ_0002271 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr2:20974569-20990158:-
CircRNA type N/A Gene ID ENSG00000118961.10
Gene Name C2orf43 Detection pipeline N/A
Sample Type Thoracic Aortic Dissection
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer CAAACTGGAAAGCGTCTGTTTG
Reverse Primer GCTCATTGGCCATTCAATAGG
Pubmed 29137225
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
144 TGGCACATGAGTTCTCAGGA TTAGAGTGAGTGCAGGGTCA 50 50 58.649 57.99 84 227 20 20
182 GCTGCCTATTGAATGGCCAA AGTGAGTGCAGGGTCATGTT 50 50 58.886 59.233 42 223 20 20
177 TGGCCAATGAGCACAAGTTT TCCTTTAGAGTGAGTGCAGGG 45 52.381 58.588 59.097 55 231 20 21
170 TGAATGGCCAATGAGCACAA GAGTGCAGGGTCATGTTTCT 45 50 58.37 57.809 51 220 20 20
162 GCCAATGAGCACAAGTTTCATG GTGCAGGGTCATGTTTCTAATGA 45.455 43.478 59.009 58.99 57 218 22 23
174 TGAGCACAAGTTTCATGTCCT ACTTTCCTTTAGAGTGAGTGCA 42.857 40.909 57.787 57.31 62 235 21 22
267 TCTGAAGTGTGAAATAGCTGCC GCTCCCAAAGACAAGAAGATTC 45.455 45.455 58.662 57.306 26 292 22 22
199 AGTTTCATGTCCTTTGGCACA ACAACATCAGAGGGTATGTCC 42.857 47.619 58.335 57.086 70 268 21 21
182 GCTGCCTATTGAATGGCCAA AGTGAGTGCAGGGTCATGTT 50 50 58.886 59.233 42 223 20 20
144 TGGCACATGAGTTCTCAGGA TTAGAGTGAGTGCAGGGTCA 50 50 58.649 57.99 84 227 20 20
177 TGGCCAATGAGCACAAGTTT TCCTTTAGAGTGAGTGCAGGG 45 52.381 58.588 59.097 55 231 20 21
170 TGAATGGCCAATGAGCACAA GAGTGCAGGGTCATGTTTCT 45 50 58.37 57.809 51 220 20 20
162 GCCAATGAGCACAAGTTTCATG GTGCAGGGTCATGTTTCTAATGA 45.455 43.478 59.009 58.99 57 218 22 23
199 AGTTTCATGTCCTTTGGCACA ACAACATCAGAGGGTATGTCC 42.857 47.619 58.335 57.086 70 268 21 21
267 TCTGAAGTGTGAAATAGCTGCC GCTCCCAAAGACAAGAAGATTC 45.455 45.455 58.662 57.306 26 292 22 22
174 TGAGCACAAGTTTCATGTCCT ACTTTCCTTTAGAGTGAGTGCA 42.857 40.909 57.787 57.31 62 235 21 22