Aliases hsa_circ_0072088 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr5:32379220-32388780:-
CircRNA type . Gene ID ENSG00000056097.15
Gene Name ZFR Detection pipeline .
Sample Type Hepg2; Helas3; H1hesc; Gm12878; Bj; A549; Nhek; Sknshra
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25234927
Aliases HSA_CIRCpedia_51574 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr5:32379220-32388780
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type H1;Liver_T14;Parietal;PA1;SH-SY5Y_D0_exp1;Heart;Temporal;Liver_T8;Liver_T15;Diencephalon;NHEK;Liver_N15;Liver_N7;HeLa_S3;Liver_N3;Occipital;Hs68;Liver_T18;Liver_N17;Liver_N19;Liver_T21
Method for Estimation poly(A)-;Ribo-;RNaseR
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 30172046
Aliases hsa_circRNA_103809 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr5:32379220-32388780:-
CircRNA type exonic Gene ID ENSG00000056097.15
Gene Name ZFR Detection pipeline n/a
Sample Type Esophageal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 27465405
Aliases circZFR/hsa_circ_0072088 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr5:32379220-32388780:-
CircRNA type N/A Gene ID ENSG00000056097.15
Gene Name ZFR Detection pipeline N/A
Sample Type Bladder cancer
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer GATTATCATACGCATTCTTCG
Reverse Primer TTTCTGAACTGCCTGTAACTC
Pubmed 27484176
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
260 GGACTGCAGACCATTAGCTC TGAAGAGGAGTTACAGGCAGT 55 47.619 58.053 58.39 72 331 20 21
263 ATCACACAGGACTGCAGACC AGGAGTTACAGGCAGTTCAGA 55 47.619 59.677 58.39 64 326 20 21
261 CTCTAGCCTTGAGAGCAACAT TGCCACCATTTATCCAACTGA 47.619 42.857 57.46 57.552 89 349 21 21
301 TGATAATCACACAGGACTGCAG TGACAAAACATGCCACCATTT 45.455 38.095 58.135 57.166 59 359 22 21
273 TGCGTATGATAATCACACAGGAC GGAGTTACAGGCAGTTCAGAAAA 43.478 43.478 58.632 58.865 53 325 23 23
276 GACTGCAGACCATTAGCTCTAG GCCACCATTTATCCAACTGAAGA 50 43.478 58.024 58.984 73 348 22 23
105 GGAAGCTCAGATAATTACCTCCC CTGAACGTGCTTTAAAACTCGT 47.826 40.909 58.099 57.808 186 290 23 22
165 AGCTCAGATAATTACCTCCCTCT AACATGCCACCATTTATCCAAC 43.478 40.909 57.913 57.53 189 353 23 22
119 TCTAGCCTTGAGAGCAACATAAA GGGAGGTAATTATCTGAGCTTCC 39.13 47.826 57.579 58.099 90 208 23 23
260 GGACTGCAGACCATTAGCTC TGAAGAGGAGTTACAGGCAGT 55 47.619 58.053 58.39 72 331 20 21
263 ATCACACAGGACTGCAGACC AGGAGTTACAGGCAGTTCAGA 55 47.619 59.677 58.39 64 326 20 21
261 CTCTAGCCTTGAGAGCAACAT TGCCACCATTTATCCAACTGA 47.619 42.857 57.46 57.552 89 349 21 21
301 TGATAATCACACAGGACTGCAG TGACAAAACATGCCACCATTT 45.455 38.095 58.135 57.166 59 359 22 21
105 GGAAGCTCAGATAATTACCTCCC CTGAACGTGCTTTAAAACTCGT 47.826 40.909 58.099 57.808 186 290 23 22
276 GACTGCAGACCATTAGCTCTAG GCCACCATTTATCCAACTGAAGA 50 43.478 58.024 58.984 73 348 22 23
273 TGCGTATGATAATCACACAGGAC GGAGTTACAGGCAGTTCAGAAAA 43.478 43.478 58.632 58.865 53 325 23 23
165 AGCTCAGATAATTACCTCCCTCT AACATGCCACCATTTATCCAAC 43.478 40.909 57.913 57.53 189 353 23 22
119 TCTAGCCTTGAGAGCAACATAAA GGGAGGTAATTATCTGAGCTTCC 39.13 47.826 57.579 58.099 90 208 23 23
263 ATCACACAGGACTGCAGACC AGGAGTTACAGGCAGTTCAGA 55 47.619 59.677 58.39 64 326 20 21
261 CTCTAGCCTTGAGAGCAACAT TGCCACCATTTATCCAACTGA 47.619 42.857 57.46 57.552 89 349 21 21
301 TGATAATCACACAGGACTGCAG TGACAAAACATGCCACCATTT 45.455 38.095 58.135 57.166 59 359 22 21
260 GGACTGCAGACCATTAGCTC TGAAGAGGAGTTACAGGCAGT 55 47.619 58.053 58.39 72 331 20 21
276 GACTGCAGACCATTAGCTCTAG GCCACCATTTATCCAACTGAAGA 50 43.478 58.024 58.984 73 348 22 23
273 TGCGTATGATAATCACACAGGAC GGAGTTACAGGCAGTTCAGAAAA 43.478 43.478 58.632 58.865 53 325 23 23
105 GGAAGCTCAGATAATTACCTCCC CTGAACGTGCTTTAAAACTCGT 47.826 40.909 58.099 57.808 186 290 23 22
165 AGCTCAGATAATTACCTCCCTCT AACATGCCACCATTTATCCAAC 43.478 40.909 57.913 57.53 189 353 23 22
119 TCTAGCCTTGAGAGCAACATAAA GGGAGGTAATTATCTGAGCTTCC 39.13 47.826 57.579 58.099 90 208 23 23
263 ATCACACAGGACTGCAGACC AGGAGTTACAGGCAGTTCAGA 55 47.619 59.677 58.39 64 326 20 21
260 GGACTGCAGACCATTAGCTC TGAAGAGGAGTTACAGGCAGT 55 47.619 58.053 58.39 72 331 20 21
276 GACTGCAGACCATTAGCTCTAG GCCACCATTTATCCAACTGAAGA 50 43.478 58.024 58.984 73 348 22 23
261 CTCTAGCCTTGAGAGCAACAT TGCCACCATTTATCCAACTGA 47.619 42.857 57.46 57.552 89 349 21 21
273 TGCGTATGATAATCACACAGGAC GGAGTTACAGGCAGTTCAGAAAA 43.478 43.478 58.632 58.865 53 325 23 23
165 AGCTCAGATAATTACCTCCCTCT AACATGCCACCATTTATCCAAC 43.478 40.909 57.913 57.53 189 353 23 22
105 GGAAGCTCAGATAATTACCTCCC CTGAACGTGCTTTAAAACTCGT 47.826 40.909 58.099 57.808 186 290 23 22
301 TGATAATCACACAGGACTGCAG TGACAAAACATGCCACCATTT 45.455 38.095 58.135 57.166 59 359 22 21
119 TCTAGCCTTGAGAGCAACATAAA GGGAGGTAATTATCTGAGCTTCC 39.13 47.826 57.579 58.099 90 208 23 23