Aliases hsa_circ_0001821 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr8:128902834-128903244:+
CircRNA type . Gene ID ENSG00000249859.3
Gene Name PVT1 Detection pipeline .
Sample Type HEK293; Hs68_RNase; Hs68_control; Nhek; K562; Huvec; Hsmm; Hmec; Hepg2; Helas3; H1hesc; Gm12878; Bj; Ag04450; A549; Nhlf; Sknshra; Mcf7
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases HSA_CIRCpedia_60029 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr8:128902834-128903244
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type Liver_N6;Liver_N14;HepG2;Parietal;Liver_N11;PA1;H9;SH-SY5Y_D2_exp1;Liver_N10;Liver_T7;Cortex;Liver_T12;Occipital;Thyroid;BJ;Liver_T11;GM12878;Kidney;AG04450;Liver_T15;Liver_N12;HeLa_S3;Forebrain;Stomach;Cerebellum;SH-SY5Y_D0_exp2;Liver_N3;Temporal;NHEK;SH-SY5Y_D4_exp1;A549;Diencephalon;K562;HUVEC;Heart;SH-SY5Y_D0_exp1;SH-SY5Y_D4_exp2;Liver_T6;Liver_T10;H1;Liver_N13;Liver_T13;Liver_N7;Liver_N8;Liver_T3;Liver_T14;Hs68;Liver_N22;Liver_N21;Liver_N20;Liver_N17;Liver_T18;Liver_N19;Liver_T17;Liver_T21
Method for Estimation Ribo-;poly(A)-;RNaseR
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases circ_005495 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr8:128902834-128903244:+
CircRNA type n/a Gene ID ENSG00000249859.3
Gene Name PVT1 Detection pipeline Find_circ
Sample Type colorectal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases hsa_circRNA_000006 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr8:128902834-128903244:+
CircRNA type exonic Gene ID ENSG00000249859.3
Gene Name PVT1 Detection pipeline n/a
Sample Type Esophageal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases circPVT1 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr8:128902834-128903244:+
CircRNA type N/A Gene ID ENSG00000249859.3
Gene Name PVT1 Detection pipeline N/A
Sample Type Osteosarcoma
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer GGTTCCACCAGCGTTATTC
Reverse Primer CAACTTCCTTTGGGTCTCC
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
284 TGGCTGAGAGGGTTGAGATC GTTCCACCAGCGTTATTCCC 55 55 58.801 58.908 63 346 20 20
207 TGTAAGACCCCGACTCTTCC GCGTTATTCCCCAGACCACT 55 55 58.446 59.748 131 337 20 20
216 TGGAATGTAAGACCCCGACT ACCAGCGTTATTCCCCAGAC 50 55 58.053 59.748 126 341 20 20
231 CCCGACTCTTCCTGGTGAA GGCGTGTGTCATTCCAGTG 57.895 57.895 58.638 59.131 139 369 19 19
154 GCTGGCTGAGAGGGTTGA GCCAAAAGATCAGGCCTCAA 61.111 50 58.928 58.451 61 214 18 20
174 GGACGAAGGACTGCAGCT TTCTGGCCAAAAGATCAGGC 61.111 50 59.34 58.451 46 219 18 20
101 TCCTGGTGAAGCATCTGATG CCATCTTGAGGGGCATCTTT 50 50 57.296 57.551 148 248 20 20
102 CCTATGGAATGTAAGACCCCG CTCCTTCTGGCCAAAAGATCA 52.381 47.619 57.597 57.923 122 223 21 21
121 AAGACCCCGACTCTTCCTGG GCACAGCCATCTTGAGGGG 60 63.158 60.905 60.752 134 254 20 19
133 AGATCTCTGCCAACTTCCTTTG AATCTCCTTCTGGCCAAAAGA 45.455 42.857 58.316 57.185 94 226 22 21
181 ACTTAGATCTCTGCCAACTTCCT TCCATGCAGCTGACAGGC 43.478 61.111 58.9 60.046 90 270 23 18
132 ATGCACGTTCCATCCGGC AGGCTCAGAAAATACTTGAACGA 61.111 39.13 60.824 58.105 165 296 18 23
232 GAGGGTTGAGATCTCTGTTTACT CCATCAGGCTCAGAAAATACTTG 43.478 43.478 57.331 57.504 70 301 23 23
207 TGTAAGACCCCGACTCTTCC GCGTTATTCCCCAGACCACT 55 55 58.446 59.748 131 337 20 20
284 TGGCTGAGAGGGTTGAGATC GTTCCACCAGCGTTATTCCC 55 55 58.801 58.908 63 346 20 20
216 TGGAATGTAAGACCCCGACT ACCAGCGTTATTCCCCAGAC 50 55 58.053 59.748 126 341 20 20
231 CCCGACTCTTCCTGGTGAA GGCGTGTGTCATTCCAGTG 57.895 57.895 58.638 59.131 139 369 19 19
174 GGACGAAGGACTGCAGCT TTCTGGCCAAAAGATCAGGC 61.111 50 59.34 58.451 46 219 18 20
154 GCTGGCTGAGAGGGTTGA GCCAAAAGATCAGGCCTCAA 61.111 50 58.928 58.451 61 214 18 20
101 TCCTGGTGAAGCATCTGATG CCATCTTGAGGGGCATCTTT 50 50 57.296 57.551 148 248 20 20
121 AAGACCCCGACTCTTCCTGG GCACAGCCATCTTGAGGGG 60 63.158 60.905 60.752 134 254 20 19
102 CCTATGGAATGTAAGACCCCG CTCCTTCTGGCCAAAAGATCA 52.381 47.619 57.597 57.923 122 223 21 21
133 AGATCTCTGCCAACTTCCTTTG AATCTCCTTCTGGCCAAAAGA 45.455 42.857 58.316 57.185 94 226 22 21
181 ACTTAGATCTCTGCCAACTTCCT TCCATGCAGCTGACAGGC 43.478 61.111 58.9 60.046 90 270 23 18
132 ATGCACGTTCCATCCGGC AGGCTCAGAAAATACTTGAACGA 61.111 39.13 60.824 58.105 165 296 18 23
232 GAGGGTTGAGATCTCTGTTTACT CCATCAGGCTCAGAAAATACTTG 43.478 43.478 57.331 57.504 70 301 23 23
284 TGGCTGAGAGGGTTGAGATC GTTCCACCAGCGTTATTCCC 55 55 58.801 58.908 63 346 20 20
207 TGTAAGACCCCGACTCTTCC GCGTTATTCCCCAGACCACT 55 55 58.446 59.748 131 337 20 20
231 CCCGACTCTTCCTGGTGAA GGCGTGTGTCATTCCAGTG 57.895 57.895 58.638 59.131 139 369 19 19
216 TGGAATGTAAGACCCCGACT ACCAGCGTTATTCCCCAGAC 50 55 58.053 59.748 126 341 20 20
154 GCTGGCTGAGAGGGTTGA GCCAAAAGATCAGGCCTCAA 61.111 50 58.928 58.451 61 214 18 20
174 GGACGAAGGACTGCAGCT TTCTGGCCAAAAGATCAGGC 61.111 50 59.34 58.451 46 219 18 20
101 TCCTGGTGAAGCATCTGATG CCATCTTGAGGGGCATCTTT 50 50 57.296 57.551 148 248 20 20
102 CCTATGGAATGTAAGACCCCG CTCCTTCTGGCCAAAAGATCA 52.381 47.619 57.597 57.923 122 223 21 21
121 AAGACCCCGACTCTTCCTGG GCACAGCCATCTTGAGGGG 60 63.158 60.905 60.752 134 254 20 19
133 AGATCTCTGCCAACTTCCTTTG AATCTCCTTCTGGCCAAAAGA 45.455 42.857 58.316 57.185 94 226 22 21
181 ACTTAGATCTCTGCCAACTTCCT TCCATGCAGCTGACAGGC 43.478 61.111 58.9 60.046 90 270 23 18
132 ATGCACGTTCCATCCGGC AGGCTCAGAAAATACTTGAACGA 61.111 39.13 60.824 58.105 165 296 18 23
232 GAGGGTTGAGATCTCTGTTTACT CCATCAGGCTCAGAAAATACTTG 43.478 43.478 57.331 57.504 70 301 23 23
284 TGGCTGAGAGGGTTGAGATC GTTCCACCAGCGTTATTCCC 55 55 58.801 58.908 63 346 20 20
216 TGGAATGTAAGACCCCGACT ACCAGCGTTATTCCCCAGAC 50 55 58.053 59.748 126 341 20 20
207 TGTAAGACCCCGACTCTTCC GCGTTATTCCCCAGACCACT 55 55 58.446 59.748 131 337 20 20
231 CCCGACTCTTCCTGGTGAA GGCGTGTGTCATTCCAGTG 57.895 57.895 58.638 59.131 139 369 19 19
154 GCTGGCTGAGAGGGTTGA GCCAAAAGATCAGGCCTCAA 61.111 50 58.928 58.451 61 214 18 20
101 TCCTGGTGAAGCATCTGATG CCATCTTGAGGGGCATCTTT 50 50 57.296 57.551 148 248 20 20
102 CCTATGGAATGTAAGACCCCG CTCCTTCTGGCCAAAAGATCA 52.381 47.619 57.597 57.923 122 223 21 21
174 GGACGAAGGACTGCAGCT TTCTGGCCAAAAGATCAGGC 61.111 50 59.34 58.451 46 219 18 20
133 AGATCTCTGCCAACTTCCTTTG AATCTCCTTCTGGCCAAAAGA 45.455 42.857 58.316 57.185 94 226 22 21
121 AAGACCCCGACTCTTCCTGG GCACAGCCATCTTGAGGGG 60 63.158 60.905 60.752 134 254 20 19
232 GAGGGTTGAGATCTCTGTTTACT CCATCAGGCTCAGAAAATACTTG 43.478 43.478 57.331 57.504 70 301 23 23
132 ATGCACGTTCCATCCGGC AGGCTCAGAAAATACTTGAACGA 61.111 39.13 60.824 58.105 165 296 18 23
181 ACTTAGATCTCTGCCAACTTCCT TCCATGCAGCTGACAGGC 43.478 61.111 58.9 60.046 90 270 23 18