Aliases hsa_circ_0084615 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr8:62593526-62596747:-
CircRNA type . Gene ID ENSG00000185942.11
Gene Name NKAIN3 Detection pipeline .
Sample Type Nhek; K562; Huvec; Hepg2; Helas3; H1hesc; Gm12878; Bj; Ag04450; A549; Sknshra; Mcf7
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25234927
Aliases HSA_CIRCpedia_61447 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr8:62593526-62596747
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type SK_N_SH;GM12878;Liver_N3;Liver_T13;Liver_N15;Occipital;Liver_T12;HUVEC;Liver_N10;H9;H1;Liver_T11;HeLa_S3;PA1;Cortex;Liver_N12;NHEK;Liver_N8;Liver_T15;Diencephalon;Liver_N6;Liver_T7;SH-SY5Y_D2_exp1;Temporal;K562;SH-SY5Y_D4_exp1;SH-SY5Y_D8_exp2;Liver_T8;Liver_T6;AG04450;Lung;Liver_N14;BJ;Cerebellum;Stomach;Forebrain;SH-SY5Y_D0_exp1;Kidney;HepG2;SH-SY5Y_D0_exp2;Liver_N13;Liver_T14;Liver_T3;Liver;SH-SY5Y_D4_exp2;Parietal;A549;Liver_T10;Thyroid;Heart;Liver_N11;Liver_N7;Hs68;Liver_N20;Liver_N19;Liver_N22;Liver_N21;Liver_T18;Liver_T20;Liver_T21;Liver_N17;Liver_T17;Liver_T19;Liver_T22;Liver_N18
Method for Estimation poly(A)-;Ribo-;RNaseR
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 30172046
Aliases hsa_circRNA_104634 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr8:62593526-62596747:-
CircRNA type exonic Gene ID ENSG00000185942.11
Gene Name NKAIN3 Detection pipeline n/a
Sample Type Esophageal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 27465405
Aliases hsa_circRNA_104634/hsa_circ_0084615 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr8:62593526-62596747:-
CircRNA type N/A Gene ID ENSG00000185942.11
Gene Name NKAIN3 Detection pipeline N/A
Sample Type Thoracic Aortic Dissection
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer CCAGCAATGCAATCACCATAAAC
Reverse Primer GATGGTGATGGAGATTTTGATGTG
Pubmed 29137225
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
349 TCTCCATCACCATCAGCATCA CAAGAATGGGAGGAAAGGCG 47.619 55 58.879 58.902 32 380 21 20
252 GGGCAGAAATGATGGATATGGG ATGGTGATTGCATTGCTGGG 50 50 58.905 59.172 77 328 22 20
230 GTGAAGTCATGCAACTCAGTCA GAAAGGCGGACTCTCAGGAA 45.455 55 58.866 59.391 139 368 22 20
281 AAATCTCCATCACCATCAGCA GCGTCTGGACATCTGTAGCT 42.857 55 57.343 59.542 29 309 21 20
291 CCACATCAAAATCTCCATCACCA GGGCGTCTGGACATCTGTA 43.478 57.895 58.982 58.801 21 311 23 19
289 TGGCATCATCCACATCAAAATCT CATCTGTAGCTGTCGTTTGGT 39.13 47.619 58.717 58.311 12 300 23 21
256 TCACCATCAGCATCATAGATTCC AGCTGTCGTTTGGTTTGATCT 43.478 42.857 58.097 58.149 38 293 23 21
304 TCCATCACCATCAGCATCATAGA ACGTGGTTTATGGTGATTGCA 43.478 42.857 59.094 58.49 34 337 23 21
162 CTTAGTGAAGTCATGCAACTCAG TGTAGCTGTCGTTTGGTTTGA 43.478 42.857 57.472 58.092 135 296 23 21
252 GGGCAGAAATGATGGATATGGG ATGGTGATTGCATTGCTGGG 50 50 58.905 59.172 77 328 22 20
349 TCTCCATCACCATCAGCATCA CAAGAATGGGAGGAAAGGCG 47.619 55 58.879 58.902 32 380 21 20
230 GTGAAGTCATGCAACTCAGTCA GAAAGGCGGACTCTCAGGAA 45.455 55 58.866 59.391 139 368 22 20
281 AAATCTCCATCACCATCAGCA GCGTCTGGACATCTGTAGCT 42.857 55 57.343 59.542 29 309 21 20
304 TCCATCACCATCAGCATCATAGA ACGTGGTTTATGGTGATTGCA 43.478 42.857 59.094 58.49 34 337 23 21
291 CCACATCAAAATCTCCATCACCA GGGCGTCTGGACATCTGTA 43.478 57.895 58.982 58.801 21 311 23 19
289 TGGCATCATCCACATCAAAATCT CATCTGTAGCTGTCGTTTGGT 39.13 47.619 58.717 58.311 12 300 23 21
256 TCACCATCAGCATCATAGATTCC AGCTGTCGTTTGGTTTGATCT 43.478 42.857 58.097 58.149 38 293 23 21
162 CTTAGTGAAGTCATGCAACTCAG TGTAGCTGTCGTTTGGTTTGA 43.478 42.857 57.472 58.092 135 296 23 21
349 TCTCCATCACCATCAGCATCA CAAGAATGGGAGGAAAGGCG 47.619 55 58.879 58.902 32 380 21 20
252 GGGCAGAAATGATGGATATGGG ATGGTGATTGCATTGCTGGG 50 50 58.905 59.172 77 328 22 20
281 AAATCTCCATCACCATCAGCA GCGTCTGGACATCTGTAGCT 42.857 55 57.343 59.542 29 309 21 20
291 CCACATCAAAATCTCCATCACCA GGGCGTCTGGACATCTGTA 43.478 57.895 58.982 58.801 21 311 23 19
230 GTGAAGTCATGCAACTCAGTCA GAAAGGCGGACTCTCAGGAA 45.455 55 58.866 59.391 139 368 22 20
304 TCCATCACCATCAGCATCATAGA ACGTGGTTTATGGTGATTGCA 43.478 42.857 59.094 58.49 34 337 23 21
289 TGGCATCATCCACATCAAAATCT CATCTGTAGCTGTCGTTTGGT 39.13 47.619 58.717 58.311 12 300 23 21
162 CTTAGTGAAGTCATGCAACTCAG TGTAGCTGTCGTTTGGTTTGA 43.478 42.857 57.472 58.092 135 296 23 21
256 TCACCATCAGCATCATAGATTCC AGCTGTCGTTTGGTTTGATCT 43.478 42.857 58.097 58.149 38 293 23 21