Aliases hsa_circ_0088452 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr9:126345447-126641300:-
CircRNA type . Gene ID ENSG00000252985.1
Gene Name RF00108 Detection pipeline .
Sample Type Hepg2; H1hesc; Bj; Ag04450; A549; Nhek; Sknshra
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25234927
Aliases HSA_CIRCpedia_62685 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr9:126345447-126641300
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type AG04450;NHEK;Parietal;BJ;H9;Diencephalon;Cortex;H1;A549;Forebrain;Liver;Liver_N14;PA1;Occipital;Temporal;HeLa_S3;Liver_N15;K562;GM12878;Liver_N8;Liver_N6;Hs68;Liver_N17;Liver_N19;Liver_T19
Method for Estimation poly(A)-;Ribo-;RNaseR
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 30172046
Aliases hsa_circ_0088452 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr9:126345447-126641300:-
CircRNA type N/A Gene ID ENSG00000252985.1
Gene Name RF00108 Detection pipeline N/A
Sample Type Active Pulmonary Tuberculosis
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer CTGGGATAGGCCACTTCAAC
Reverse Primer TCGTGATCCTGAATGTGGAC
Pubmed 28846924
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
292 ATCCAGGGCCATGTTTCTGA TGTTGAAGTGGCCTATCCCA 50 50 58.998 58.633 78 369 20 20
219 AGGTCATTGAGGTGCCATCA GACAGGTGGCACTCTTTCAG 50 55 59.006 58.483 130 348 20 20
219 AGAAGGTCATTGAGGTGCCA AGGTGGCACTCTTTCAGGTA 50 50 58.933 58.27 127 345 20 20
214 GAGGTGCCATCAAGACACAC CAGGACAGGTGGCACTCTTT 55 55 58.84 59.891 138 351 20 20
113 CTGGGGAAGAGGCATAGAGA TGAGATAGCTATGCACGTGAGA 55 45.455 57.906 58.786 172 284 20 22
200 CACACTTCCCCTGCCTTCT CCAGGACAGGTGGCACTC 57.895 66.667 59.236 59.651 153 352 19 18
245 CACTTCCCCTGCCTTCTCTG GCAGAATCCAGAGACCACAT 60 50 60.036 57.294 155 399 20 20
115 GGGGAAGAGGCATAGAGAAGG TGTTTGAGATAGCTATGCACGT 57.143 40.909 59.303 57.877 174 288 21 22
292 ATCCAGGGCCATGTTTCTGA TGTTGAAGTGGCCTATCCCA 50 50 58.998 58.633 78 369 20 20
219 AGAAGGTCATTGAGGTGCCA AGGTGGCACTCTTTCAGGTA 50 50 58.933 58.27 127 345 20 20
219 AGGTCATTGAGGTGCCATCA GACAGGTGGCACTCTTTCAG 50 55 59.006 58.483 130 348 20 20
214 GAGGTGCCATCAAGACACAC CAGGACAGGTGGCACTCTTT 55 55 58.84 59.891 138 351 20 20
245 CACTTCCCCTGCCTTCTCTG GCAGAATCCAGAGACCACAT 60 50 60.036 57.294 155 399 20 20
113 CTGGGGAAGAGGCATAGAGA TGAGATAGCTATGCACGTGAGA 55 45.455 57.906 58.786 172 284 20 22
200 CACACTTCCCCTGCCTTCT CCAGGACAGGTGGCACTC 57.895 66.667 59.236 59.651 153 352 19 18
115 GGGGAAGAGGCATAGAGAAGG TGTTTGAGATAGCTATGCACGT 57.143 40.909 59.303 57.877 174 288 21 22