Aliases hsa_circ_0089974 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chrX:17705861-17710588:+
CircRNA type . Gene ID ENSG00000188158.15
Gene Name NHS Detection pipeline .
Sample Type Hepg2; Helas3; H1hesc; Bj; A549; Nhek
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25234927
Aliases HSA_CIRCpedia_65535 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chrX:17705861-17710588
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type Cortex;HeLa_S3;A549;BJ;Temporal;Diencephalon;Cerebellum;Occipital;Liver_T10;Liver_T3;HepG2;PA1;H1;NHEK;Parietal;Hs68;Liver_T19;Liver_N20
Method for Estimation Ribo-;poly(A)-;RNaseR
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 30172046
Aliases hsa_circRNA_104983 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chrX:17705861-17710588:+
CircRNA type exonic Gene ID ENSG00000188158.15
Gene Name NHS Detection pipeline n/a
Sample Type Esophageal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 27465405
Aliases hsa_circRNA_104983/hsa_circ_0089974 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chrX:17705861-17710588:+
CircRNA type N/A Gene ID ENSG00000188158.15
Gene Name NHS Detection pipeline N/A
Sample Type Esophageal cancer
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer GGCGTGAGTTTAAGGACCGT
Reverse Primer GTGGCTGGGAGGAAGATGTT
Pubmed 27465405
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
100 CCTTTCCATTGCAGCTCCTC GGTTGGAGACGGCGTTAAAA 55 50 58.899 58.771 112 211 20 20
122 GCGTGAGTTTAAGGACCGTC CTTGTGGCTGGGAGGAAGAT 55 55 58.934 59.377 169 290 20 20
128 CCAGAGGAGGCGTGAGTTTA GTGGCTGGGAGGAAGATGTT 55 55 59.104 59.67 160 287 20 20
104 CCCCTTTCCATTGCAGCTC CAGGTTGGAGACGGCGTTA 57.895 57.895 58.804 59.709 110 213 19 19
179 TTTTAACGCCGTCTCCAACC AAGCCCAGGATCTGTCACC 50 57.895 58.771 59.006 192 370 20 19
143 CCTACCCTCCAGCTCACAG CTGGGAGGAAGATGTTGCG 63.158 57.895 58.793 58.227 141 283 19 19
117 AGGAGGCGTGAGTTTAAGGA GGAGGAAGATGTTGCGCTG 50 57.895 58.359 58.907 164 280 20 19
138 AGCCTACCCTCCAGCTCA GAAGATGTTGCGCTGCTGG 61.111 57.895 59.219 59.864 139 276 18 19
121 GTGAGTTTAAGGACCGTCACT CCTTGTGGCTGGGAGGAA 47.619 61.111 57.618 58.83 171 291 21 18
100 CACTGCCAGCCTACCCTC CAGCTTACTCTCTATGTCCAGGT 66.667 47.826 59.413 59.043 132 231 18 23
122 CTCCACTGCCAGCCTACC GGGCGCGGTAGTACACAC 66.667 66.667 59.413 60.508 129 250 18 18
119 CAGCTCCTCCACTGCCAG AGTACACACTCAGCTTACTCTCT 66.667 43.478 59.732 58.342 123 241 18 23
100 TGCCAGCCTACCCTCCAG ACTCAGCTTACTCTCTATGTCCA 66.667 43.478 60.689 58.139 135 234 18 23
128 CCAGAGGAGGCGTGAGTTTA GTGGCTGGGAGGAAGATGTT 55 55 59.104 59.67 160 287 20 20
179 TTTTAACGCCGTCTCCAACC AAGCCCAGGATCTGTCACC 50 57.895 58.771 59.006 192 370 20 19
100 CCTTTCCATTGCAGCTCCTC GGTTGGAGACGGCGTTAAAA 55 50 58.899 58.771 112 211 20 20
117 AGGAGGCGTGAGTTTAAGGA GGAGGAAGATGTTGCGCTG 50 57.895 58.359 58.907 164 280 20 19
122 GCGTGAGTTTAAGGACCGTC CTTGTGGCTGGGAGGAAGAT 55 55 58.934 59.377 169 290 20 20
104 CCCCTTTCCATTGCAGCTC CAGGTTGGAGACGGCGTTA 57.895 57.895 58.804 59.709 110 213 19 19
143 CCTACCCTCCAGCTCACAG CTGGGAGGAAGATGTTGCG 63.158 57.895 58.793 58.227 141 283 19 19
138 AGCCTACCCTCCAGCTCA GAAGATGTTGCGCTGCTGG 61.111 57.895 59.219 59.864 139 276 18 19
122 CTCCACTGCCAGCCTACC GGGCGCGGTAGTACACAC 66.667 66.667 59.413 60.508 129 250 18 18
100 CACTGCCAGCCTACCCTC CAGCTTACTCTCTATGTCCAGGT 66.667 47.826 59.413 59.043 132 231 18 23
121 GTGAGTTTAAGGACCGTCACT CCTTGTGGCTGGGAGGAA 47.619 61.111 57.618 58.83 171 291 21 18
119 CAGCTCCTCCACTGCCAG AGTACACACTCAGCTTACTCTCT 66.667 43.478 59.732 58.342 123 241 18 23
100 TGCCAGCCTACCCTCCAG ACTCAGCTTACTCTCTATGTCCA 66.667 43.478 60.689 58.139 135 234 18 23
100 CCTTTCCATTGCAGCTCCTC GGTTGGAGACGGCGTTAAAA 55 50 58.899 58.771 112 211 20 20
179 TTTTAACGCCGTCTCCAACC AAGCCCAGGATCTGTCACC 50 57.895 58.771 59.006 192 370 20 19
128 CCAGAGGAGGCGTGAGTTTA GTGGCTGGGAGGAAGATGTT 55 55 59.104 59.67 160 287 20 20
117 AGGAGGCGTGAGTTTAAGGA GGAGGAAGATGTTGCGCTG 50 57.895 58.359 58.907 164 280 20 19
122 GCGTGAGTTTAAGGACCGTC CTTGTGGCTGGGAGGAAGAT 55 55 58.934 59.377 169 290 20 20
104 CCCCTTTCCATTGCAGCTC CAGGTTGGAGACGGCGTTA 57.895 57.895 58.804 59.709 110 213 19 19
143 CCTACCCTCCAGCTCACAG CTGGGAGGAAGATGTTGCG 63.158 57.895 58.793 58.227 141 283 19 19
138 AGCCTACCCTCCAGCTCA GAAGATGTTGCGCTGCTGG 61.111 57.895 59.219 59.864 139 276 18 19
121 GTGAGTTTAAGGACCGTCACT CCTTGTGGCTGGGAGGAA 47.619 61.111 57.618 58.83 171 291 21 18
100 CACTGCCAGCCTACCCTC CAGCTTACTCTCTATGTCCAGGT 66.667 47.826 59.413 59.043 132 231 18 23
119 CAGCTCCTCCACTGCCAG AGTACACACTCAGCTTACTCTCT 66.667 43.478 59.732 58.342 123 241 18 23
122 CTCCACTGCCAGCCTACC GGGCGCGGTAGTACACAC 66.667 66.667 59.413 60.508 129 250 18 18
100 TGCCAGCCTACCCTCCAG ACTCAGCTTACTCTCTATGTCCA 66.667 43.478 60.689 58.139 135 234 18 23