Aliases hsa_circ_0005075 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr1:21377358-21415706:-
CircRNA type . Gene ID ENSG00000236216.5
Gene Name PPP1R11P1 Detection pipeline .
Sample Type Hs68_RNase; Hs68_control; K562; Huvec; Hsmm; Hepg2; Helas3; H1hesc; Bj; Ag04450; A549; Nhlf; Sknshra; Mcf7
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25234927
Aliases HSA_CIRCpedia_29965 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr1:21377358-21415706
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type Parietal;Liver_T6;Liver_T3;H1;SH-SY5Y_D4_exp1;Liver_N7;HeLa_S3;Liver_N10;SH-SY5Y_D2_exp1;AG04450;Cerebellum;PA1;H9;HepG2;A549;Liver_T11;Liver_T15;Liver_T10;Cortex;Forebrain;K562;Liver_T12;Liver_T7;Occipital;Diencephalon;Liver_N14;Liver_N12;Liver_N13;Temporal;Kidney;Liver_N11;Thyroid;BJ;Liver_T14;Stomach;Hs68;Liver_N19;Liver_N20;Liver_N17;Liver_N21;Liver_T18;Liver_T22;Liver_N18;Liver_T21;Liver_N22;Liver_T19
Method for Estimation Ribo-;poly(A)-;RNaseR
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 30172046
Aliases hsa_circRNA_100085 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr1:21377358-21415706:-
CircRNA type exonic Gene ID ENSG00000236216.5
Gene Name PPP1R11P1 Detection pipeline n/a
Sample Type Esophageal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 27465405
Aliases hsa_circ_0005075 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr1:21377358-21415706:-
CircRNA type N/A Gene ID ENSG00000236216.5
Gene Name PPP1R11P1 Detection pipeline N/A
Sample Type Liver cell carcinoma
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer CCTACCCCATCCCCTTATTC
Reverse Primer ACCGTGCTGTAGACTGCTGAG
Pubmed 27258521
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
220 GCTGTCTTGCCACTTGTGTT ACGGTGAGTGTCTGAAGGTT 50 50 59.259 58.879 107 326 20 20
289 GCTGAATAAGGGGATGGGGT ATCGAATCTTCACTCCCGCT 55 50 59.146 58.885 76 364 20 20
246 TGCCACTTGTGTTACCTGTG ATCTTCACTCCCGCTGTCTC 50 55 58.326 59.179 114 359 20 20
307 ATAAGGGGATGGGGTAGGGG ACCTGTGCAACAACCTCTTG 60 50 59.801 58.607 81 387 20 20
271 TGTGCTGAATAAGGGGATGG TCTCAGCAGTCTACAGCACG 50 55 57.265 59.476 73 343 20 20
238 GGATGGGGTAGGGGTTCC GGTGAGTGTCTGAAGGTTGTC 66.667 52.381 58.33 58.515 87 324 18 21
287 AGGGGACGATGCATGTCC GTGTGTGTGCTTTTGTGTGTG 61.111 47.619 59.089 59.015 12 298 18 21
229 TGTCTTGCCACTTGTGTTACC CAGTCTACAGCACGGTGAGT 47.619 55 58.706 59.401 109 337 21 20
196 GGGTTCCCGGCTGTCTTG TGTGCTTTTGTGTGTGAATCCT 66.667 40.909 60.36 58.977 98 293 18 22
291 GCCCCTTGTTTATTTCATGTGC CTGTCTCAGCAGTCTACAGC 45.455 55 58.738 57.724 56 346 22 20
373 TCCAGGGGACGATGCATG GCAACAACCTCTTGAGGATCG 61.111 52.381 59.09 59.266 9 381 18 21
275 GACGATGCATGTCCCGGG GCTTTTGTGTGTGAATCCTTGG 66.667 45.455 60.589 58.616 16 290 18 22
259 GGATGCCCCTTGTTTATTTCATG GGTTGTCAAATTGTGTGTGTGC 43.478 45.455 58.304 59.397 52 310 23 22
239 CCCTTGTTTATTTCATGTGCTGA GTGTGTGCTTTTGTGTGTGAAT 39.13 40.909 57.61 58.489 58 296 23 22
289 GCTGAATAAGGGGATGGGGT ATCGAATCTTCACTCCCGCT 55 50 59.146 58.885 76 364 20 20
220 GCTGTCTTGCCACTTGTGTT ACGGTGAGTGTCTGAAGGTT 50 50 59.259 58.879 107 326 20 20
246 TGCCACTTGTGTTACCTGTG ATCTTCACTCCCGCTGTCTC 50 55 58.326 59.179 114 359 20 20
307 ATAAGGGGATGGGGTAGGGG ACCTGTGCAACAACCTCTTG 60 50 59.801 58.607 81 387 20 20
229 TGTCTTGCCACTTGTGTTACC CAGTCTACAGCACGGTGAGT 47.619 55 58.706 59.401 109 337 21 20
271 TGTGCTGAATAAGGGGATGG TCTCAGCAGTCTACAGCACG 50 55 57.265 59.476 73 343 20 20
287 AGGGGACGATGCATGTCC GTGTGTGTGCTTTTGTGTGTG 61.111 47.619 59.089 59.015 12 298 18 21
373 TCCAGGGGACGATGCATG GCAACAACCTCTTGAGGATCG 61.111 52.381 59.09 59.266 9 381 18 21
291 GCCCCTTGTTTATTTCATGTGC CTGTCTCAGCAGTCTACAGC 45.455 55 58.738 57.724 56 346 22 20
238 GGATGGGGTAGGGGTTCC GGTGAGTGTCTGAAGGTTGTC 66.667 52.381 58.33 58.515 87 324 18 21
196 GGGTTCCCGGCTGTCTTG TGTGCTTTTGTGTGTGAATCCT 66.667 40.909 60.36 58.977 98 293 18 22
275 GACGATGCATGTCCCGGG GCTTTTGTGTGTGAATCCTTGG 66.667 45.455 60.589 58.616 16 290 18 22
259 GGATGCCCCTTGTTTATTTCATG GGTTGTCAAATTGTGTGTGTGC 43.478 45.455 58.304 59.397 52 310 23 22
239 CCCTTGTTTATTTCATGTGCTGA GTGTGTGCTTTTGTGTGTGAAT 39.13 40.909 57.61 58.489 58 296 23 22
289 GCTGAATAAGGGGATGGGGT ATCGAATCTTCACTCCCGCT 55 50 59.146 58.885 76 364 20 20
220 GCTGTCTTGCCACTTGTGTT ACGGTGAGTGTCTGAAGGTT 50 50 59.259 58.879 107 326 20 20
246 TGCCACTTGTGTTACCTGTG ATCTTCACTCCCGCTGTCTC 50 55 58.326 59.179 114 359 20 20
229 TGTCTTGCCACTTGTGTTACC CAGTCTACAGCACGGTGAGT 47.619 55 58.706 59.401 109 337 21 20
307 ATAAGGGGATGGGGTAGGGG ACCTGTGCAACAACCTCTTG 60 50 59.801 58.607 81 387 20 20
271 TGTGCTGAATAAGGGGATGG TCTCAGCAGTCTACAGCACG 50 55 57.265 59.476 73 343 20 20
287 AGGGGACGATGCATGTCC GTGTGTGTGCTTTTGTGTGTG 61.111 47.619 59.089 59.015 12 298 18 21
373 TCCAGGGGACGATGCATG GCAACAACCTCTTGAGGATCG 61.111 52.381 59.09 59.266 9 381 18 21
291 GCCCCTTGTTTATTTCATGTGC CTGTCTCAGCAGTCTACAGC 45.455 55 58.738 57.724 56 346 22 20
238 GGATGGGGTAGGGGTTCC GGTGAGTGTCTGAAGGTTGTC 66.667 52.381 58.33 58.515 87 324 18 21
196 GGGTTCCCGGCTGTCTTG TGTGCTTTTGTGTGTGAATCCT 66.667 40.909 60.36 58.977 98 293 18 22
275 GACGATGCATGTCCCGGG GCTTTTGTGTGTGAATCCTTGG 66.667 45.455 60.589 58.616 16 290 18 22
259 GGATGCCCCTTGTTTATTTCATG GGTTGTCAAATTGTGTGTGTGC 43.478 45.455 58.304 59.397 52 310 23 22
239 CCCTTGTTTATTTCATGTGCTGA GTGTGTGCTTTTGTGTGTGAAT 39.13 40.909 57.61 58.489 58 296 23 22
289 GCTGAATAAGGGGATGGGGT ATCGAATCTTCACTCCCGCT 55 50 59.146 58.885 76 364 20 20
220 GCTGTCTTGCCACTTGTGTT ACGGTGAGTGTCTGAAGGTT 50 50 59.259 58.879 107 326 20 20
246 TGCCACTTGTGTTACCTGTG ATCTTCACTCCCGCTGTCTC 50 55 58.326 59.179 114 359 20 20
229 TGTCTTGCCACTTGTGTTACC CAGTCTACAGCACGGTGAGT 47.619 55 58.706 59.401 109 337 21 20
307 ATAAGGGGATGGGGTAGGGG ACCTGTGCAACAACCTCTTG 60 50 59.801 58.607 81 387 20 20
271 TGTGCTGAATAAGGGGATGG TCTCAGCAGTCTACAGCACG 50 55 57.265 59.476 73 343 20 20
373 TCCAGGGGACGATGCATG GCAACAACCTCTTGAGGATCG 61.111 52.381 59.09 59.266 9 381 18 21
287 AGGGGACGATGCATGTCC GTGTGTGTGCTTTTGTGTGTG 61.111 47.619 59.089 59.015 12 298 18 21
196 GGGTTCCCGGCTGTCTTG TGTGCTTTTGTGTGTGAATCCT 66.667 40.909 60.36 58.977 98 293 18 22
291 GCCCCTTGTTTATTTCATGTGC CTGTCTCAGCAGTCTACAGC 45.455 55 58.738 57.724 56 346 22 20
259 GGATGCCCCTTGTTTATTTCATG GGTTGTCAAATTGTGTGTGTGC 43.478 45.455 58.304 59.397 52 310 23 22
275 GACGATGCATGTCCCGGG GCTTTTGTGTGTGAATCCTTGG 66.667 45.455 60.589 58.616 16 290 18 22
239 CCCTTGTTTATTTCATGTGCTGA GTGTGTGCTTTTGTGTGTGAAT 39.13 40.909 57.61 58.489 58 296 23 22
238 GGATGGGGTAGGGGTTCC GGTGAGTGTCTGAAGGTTGTC 66.667 52.381 58.33 58.515 87 324 18 21