Aliases hsa_circ_0007031 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr13:113158345-113181798:-
CircRNA type . Gene ID ENSG00000126216.8
Gene Name TUBGCP3 Detection pipeline .
Sample Type Hs68_RNase; Hs68_control; K562; Hepg2; Helas3; H1hesc; Gm12878; Ag04450; A549
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25234927
Aliases HSA_CIRCpedia_10104 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr13:113158345-113181798
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type GM12878;HepG2;Thyroid;NHEK;Liver_N13;Liver_T3;K562;H9;AG04450;A549;PA1;Liver_T6;Liver_T13;Liver_T10;Heart;Liver_T7;Cerebellum;Liver_T12;Liver_T14;Cortex;H1;Liver_N11;Parietal;HeLa_S3;Liver;Occipital;Hs68;Liver_T21;Liver_T22;Liver_T19;Liver_N21;Liver_N17
Method for Estimation poly(A)-;Ribo-;RNaseR
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 30172046
Aliases hsa_circRNA_101299 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr13:113158345-113181798:-
CircRNA type exonic Gene ID ENSG00000126216.8
Gene Name TUBGCP3 Detection pipeline n/a
Sample Type Esophageal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 27465405
Aliases hsa_circ_0007031 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr13:113158345-113181798:-
CircRNA type N/A Gene ID ENSG00000126216.8
Gene Name TUBGCP3 Detection pipeline N/A
Sample Type Colorectal cancer
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer ACATCACATTTGAGGTGCTTG
Reverse Primer AAAAGGACCTTCCTAGACTGATC
Pubmed 28656150
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
191 GAACATTCAAGCACCTGGGA CGATGGATCAGTCTAGGAAGGT 50 50 58.09 58.773 118 308 20 22
315 CTCGTGTGCAGCAATGATGT ATCGACTGTGGCACGACAA 50 52.632 59.199 59.634 51 365 20 19
241 ACATTCAAGCACCTGGGAAAC CTGTGGCACGACAAGTATACT 47.619 47.619 59.036 57.768 120 360 21 21
238 CAAGCACCTGGGAAACAACA GACTGTGGCACGACAAGTAT 50 50 58.89 57.92 125 362 20 20
256 TCCCAAGAACATTCAAGCACC AGATCGACTGTGGCACGA 47.619 55.556 58.761 58.319 112 367 21 18
293 CCAAAGCTCATCCCAAGAACA TGTAGCATCAGATCCAACAGTT 47.619 40.909 58.482 57.442 102 394 21 22
285 TGTTCCAAAGCTCATCCCAAG TCCAACAGTTAAAACAGATCGAC 47.619 39.13 58.482 57.082 98 382 21 23
179 AGCACCTGGGAAACAACAATT TGGATCAGTCTAGGAAGGTAGG 42.857 50 58.602 57.814 127 305 21 22
238 CAAGCACCTGGGAAACAACA GACTGTGGCACGACAAGTAT 50 50 58.89 57.92 125 362 20 20
191 GAACATTCAAGCACCTGGGA CGATGGATCAGTCTAGGAAGGT 50 50 58.09 58.773 118 308 20 22
315 CTCGTGTGCAGCAATGATGT ATCGACTGTGGCACGACAA 50 52.632 59.199 59.634 51 365 20 19
241 ACATTCAAGCACCTGGGAAAC CTGTGGCACGACAAGTATACT 47.619 47.619 59.036 57.768 120 360 21 21
256 TCCCAAGAACATTCAAGCACC AGATCGACTGTGGCACGA 47.619 55.556 58.761 58.319 112 367 21 18
285 TGTTCCAAAGCTCATCCCAAG TCCAACAGTTAAAACAGATCGAC 47.619 39.13 58.482 57.082 98 382 21 23
179 AGCACCTGGGAAACAACAATT TGGATCAGTCTAGGAAGGTAGG 42.857 50 58.602 57.814 127 305 21 22
293 CCAAAGCTCATCCCAAGAACA TGTAGCATCAGATCCAACAGTT 47.619 40.909 58.482 57.442 102 394 21 22
315 CTCGTGTGCAGCAATGATGT ATCGACTGTGGCACGACAA 50 52.632 59.199 59.634 51 365 20 19
241 ACATTCAAGCACCTGGGAAAC CTGTGGCACGACAAGTATACT 47.619 47.619 59.036 57.768 120 360 21 21
238 CAAGCACCTGGGAAACAACA GACTGTGGCACGACAAGTAT 50 50 58.89 57.92 125 362 20 20
256 TCCCAAGAACATTCAAGCACC AGATCGACTGTGGCACGA 47.619 55.556 58.761 58.319 112 367 21 18
179 AGCACCTGGGAAACAACAATT TGGATCAGTCTAGGAAGGTAGG 42.857 50 58.602 57.814 127 305 21 22
191 GAACATTCAAGCACCTGGGA CGATGGATCAGTCTAGGAAGGT 50 50 58.09 58.773 118 308 20 22
285 TGTTCCAAAGCTCATCCCAAG TCCAACAGTTAAAACAGATCGAC 47.619 39.13 58.482 57.082 98 382 21 23
293 CCAAAGCTCATCCCAAGAACA TGTAGCATCAGATCCAACAGTT 47.619 40.909 58.482 57.442 102 394 21 22
238 CAAGCACCTGGGAAACAACA GACTGTGGCACGACAAGTAT 50 50 58.89 57.92 125 362 20 20
191 GAACATTCAAGCACCTGGGA CGATGGATCAGTCTAGGAAGGT 50 50 58.09 58.773 118 308 20 22
315 CTCGTGTGCAGCAATGATGT ATCGACTGTGGCACGACAA 50 52.632 59.199 59.634 51 365 20 19
241 ACATTCAAGCACCTGGGAAAC CTGTGGCACGACAAGTATACT 47.619 47.619 59.036 57.768 120 360 21 21
256 TCCCAAGAACATTCAAGCACC AGATCGACTGTGGCACGA 47.619 55.556 58.761 58.319 112 367 21 18
285 TGTTCCAAAGCTCATCCCAAG TCCAACAGTTAAAACAGATCGAC 47.619 39.13 58.482 57.082 98 382 21 23
179 AGCACCTGGGAAACAACAATT TGGATCAGTCTAGGAAGGTAGG 42.857 50 58.602 57.814 127 305 21 22
293 CCAAAGCTCATCCCAAGAACA TGTAGCATCAGATCCAACAGTT 47.619 40.909 58.482 57.442 102 394 21 22