Aliases hsa_circ_0005567 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr1:51868106-51874004:-
CircRNA type . Gene ID ENSG00000078618.21
Gene Name NRDC Detection pipeline .
Sample Type Hs68_RNase; Hs68_control; Nhek; K562; Hepg2; H1hesc; Gm12878; Bj; Ag04450; A549; Sknshra
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25234927
Aliases HSA_CIRCpedia_32260 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr1:51868106-51874004
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type Cortex;Liver_N14;Liver;Liver_T10;Liver_N7;Cerebellum;PA1;AG04450;NHEK;Liver_T7;SH-SY5Y_D0_exp1;Temporal;Heart;H1;Liver_T14;Liver_T13;Occipital;SH-SY5Y_D0_exp2;Liver_N11;Stomach;Lung;SH-SY5Y_D4_exp1;Liver_N3;Liver_T6;SH-SY5Y_D8_exp2;Diencephalon;BJ;Liver_T15;Liver_N10;Forebrain;Liver_N12;SH-SY5Y_D2_exp1;Kidney;Liver_N8;Liver_T11;Parietal;Liver_T8;Liver_T3;H9;A549;Liver_N6;Liver_N13;Liver_T12;K562;HepG2;GM12878;Liver_N15;Thyroid;Hs68;Liver_T21;Liver_T19;Liver_N22;Liver_T22;Liver_T17;Liver_N20;Liver_T20;Liver_N21;Liver_N17;Liver_N18;Liver_N19
Method for Estimation Ribo-;poly(A)-;RNaseR
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 30172046
Aliases circ_005876 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr1:51868106-51874004:-
CircRNA type n/a Gene ID ENSG00000078618.21
Gene Name NRDC Detection pipeline Find_circ
Sample Type colorectal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25624062
Aliases hsa_circRNA_100226 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr1:51868106-51874004:-
CircRNA type exonic Gene ID ENSG00000078618.21
Gene Name NRDC Detection pipeline n/a
Sample Type Esophageal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 27465405
Aliases circRNA-MSR/hsa_circ_0005567 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr1:51868106-51874004:-
CircRNA type N/A Gene ID ENSG00000078618.21
Gene Name NRDC Detection pipeline N/A
Sample Type Osteoarthritis
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer CCTCTCTCTAATCAGCCCTCTG
Reverse Primer GAGGACCTGGGAGTAGATGAG
Pubmed 28624198
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
231 ATCTGCAACTGGACCTGTCA GAGTCAGGGAAGGCTCAGTT 50 55 58.941 59.02 40 270 20 20
263 ACCTGTCAGCGAACTTGAGT TGAGCCGTCTACAGCAAGAA 50 50 59.247 59.034 52 314 20 20
275 CTGGACCTGTCAGCGAACTT AGAAGAGCTGAGCCGTCTAC 55 55 59.966 58.9 48 322 20 20
212 TGTATCTGCAACTGGACCTG AACCTCTTCAGCAGCACCTA 50 50 57.232 58.648 37 248 20 20
208 AACTGGACCTGTCAGCGAA GTTGGAACCTCTTCAGCAGC 52.632 55 58.867 59.122 46 253 19 20
312 TGCCAACAAAAGGATCAGACTG GCCGTCTACAGCAAGAAACA 45.455 50 59.113 58.491 0 311 22 20
222 CTGTCAGCGAACTTGAGTCTAC GTGTAGAGTCAGGGAAGGCT 50 55 58.762 58.437 54 275 22 20
264 CCAACAAAAGGATCAGACTGGAA AGGGAAGGCTCAGTTGGAAC 43.478 55 58.856 59.598 2 265 23 20
230 CCAAGTTTGTATCTGCAACTGG GGCTCAGTTGGAACCTCTTC 45.455 55 57.835 58.185 30 259 22 20
189 GTCAGCGAACTTGAGTCTACATT TCTTCAGCAGCACCTACAAGA 43.478 47.619 58.761 59.029 56 244 23 21
146 ACACACATTCAGGTCATACACA CGTCTACAGCAAGAAACAGCA 40.909 47.619 57.65 58.865 164 309 22 21
275 CTGGACCTGTCAGCGAACTT AGAAGAGCTGAGCCGTCTAC 55 55 59.966 58.9 48 322 20 20
231 ATCTGCAACTGGACCTGTCA GAGTCAGGGAAGGCTCAGTT 50 55 58.941 59.02 40 270 20 20
263 ACCTGTCAGCGAACTTGAGT TGAGCCGTCTACAGCAAGAA 50 50 59.247 59.034 52 314 20 20
208 AACTGGACCTGTCAGCGAA GTTGGAACCTCTTCAGCAGC 52.632 55 58.867 59.122 46 253 19 20
212 TGTATCTGCAACTGGACCTG AACCTCTTCAGCAGCACCTA 50 50 57.232 58.648 37 248 20 20
312 TGCCAACAAAAGGATCAGACTG GCCGTCTACAGCAAGAAACA 45.455 50 59.113 58.491 0 311 22 20
222 CTGTCAGCGAACTTGAGTCTAC GTGTAGAGTCAGGGAAGGCT 50 55 58.762 58.437 54 275 22 20
264 CCAACAAAAGGATCAGACTGGAA AGGGAAGGCTCAGTTGGAAC 43.478 55 58.856 59.598 2 265 23 20
189 GTCAGCGAACTTGAGTCTACATT TCTTCAGCAGCACCTACAAGA 43.478 47.619 58.761 59.029 56 244 23 21
230 CCAAGTTTGTATCTGCAACTGG GGCTCAGTTGGAACCTCTTC 45.455 55 57.835 58.185 30 259 22 20
146 ACACACATTCAGGTCATACACA CGTCTACAGCAAGAAACAGCA 40.909 47.619 57.65 58.865 164 309 22 21
275 CTGGACCTGTCAGCGAACTT AGAAGAGCTGAGCCGTCTAC 55 55 59.966 58.9 48 322 20 20
263 ACCTGTCAGCGAACTTGAGT TGAGCCGTCTACAGCAAGAA 50 50 59.247 59.034 52 314 20 20
231 ATCTGCAACTGGACCTGTCA GAGTCAGGGAAGGCTCAGTT 50 55 58.941 59.02 40 270 20 20
208 AACTGGACCTGTCAGCGAA GTTGGAACCTCTTCAGCAGC 52.632 55 58.867 59.122 46 253 19 20
212 TGTATCTGCAACTGGACCTG AACCTCTTCAGCAGCACCTA 50 50 57.232 58.648 37 248 20 20
312 TGCCAACAAAAGGATCAGACTG GCCGTCTACAGCAAGAAACA 45.455 50 59.113 58.491 0 311 22 20
146 ACACACATTCAGGTCATACACA CGTCTACAGCAAGAAACAGCA 40.909 47.619 57.65 58.865 164 309 22 21
230 CCAAGTTTGTATCTGCAACTGG GGCTCAGTTGGAACCTCTTC 45.455 55 57.835 58.185 30 259 22 20
189 GTCAGCGAACTTGAGTCTACATT TCTTCAGCAGCACCTACAAGA 43.478 47.619 58.761 59.029 56 244 23 21
222 CTGTCAGCGAACTTGAGTCTAC GTGTAGAGTCAGGGAAGGCT 50 55 58.762 58.437 54 275 22 20
264 CCAACAAAAGGATCAGACTGGAA AGGGAAGGCTCAGTTGGAAC 43.478 55 58.856 59.598 2 265 23 20
231 ATCTGCAACTGGACCTGTCA GAGTCAGGGAAGGCTCAGTT 50 55 58.941 59.02 40 270 20 20
275 CTGGACCTGTCAGCGAACTT AGAAGAGCTGAGCCGTCTAC 55 55 59.966 58.9 48 322 20 20
208 AACTGGACCTGTCAGCGAA GTTGGAACCTCTTCAGCAGC 52.632 55 58.867 59.122 46 253 19 20
212 TGTATCTGCAACTGGACCTG AACCTCTTCAGCAGCACCTA 50 50 57.232 58.648 37 248 20 20
263 ACCTGTCAGCGAACTTGAGT TGAGCCGTCTACAGCAAGAA 50 50 59.247 59.034 52 314 20 20
312 TGCCAACAAAAGGATCAGACTG GCCGTCTACAGCAAGAAACA 45.455 50 59.113 58.491 0 311 22 20
222 CTGTCAGCGAACTTGAGTCTAC GTGTAGAGTCAGGGAAGGCT 50 55 58.762 58.437 54 275 22 20
264 CCAACAAAAGGATCAGACTGGAA AGGGAAGGCTCAGTTGGAAC 43.478 55 58.856 59.598 2 265 23 20
230 CCAAGTTTGTATCTGCAACTGG GGCTCAGTTGGAACCTCTTC 45.455 55 57.835 58.185 30 259 22 20
189 GTCAGCGAACTTGAGTCTACATT TCTTCAGCAGCACCTACAAGA 43.478 47.619 58.761 59.029 56 244 23 21
146 ACACACATTCAGGTCATACACA CGTCTACAGCAAGAAACAGCA 40.909 47.619 57.65 58.865 164 309 22 21