Aliases rno_circRNA_004637 Scientific name Rattus rattus
Organism Rat Genome Locus chr14:113570860-113589878:+
CircRNA type exonic Gene ID n/a
Gene Name Ccdc88a Detection pipeline Microarray
Sample Type Kidney
Method for Estimation n/a
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer n/a
Reverse Primer n/a
Pubmed 28778982
Aliases rno_circRNA_004637 Scientific name Rattus rattus
Organism Rat Genome Locus chr14:113570860-113589878:+
CircRNA type exonic Gene ID n/a
Gene Name Ccdc88a Detection pipeline n/a
Sample Type Kidney
Method for Estimation Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer GATCAAGAGTTCATGAATGCTACGC
Reverse Primer CAGTGCAAGAATCTGAGCCTGC
Pubmed 28778982
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
100 AGTTCATGAATGCTACGCTGC GCAAGAATCTGAGCCTGCAA 47.619 50 59.332 58.829 192 291 21 20
165 CAAGAGTTCATGAATGCTACGC GGCATTCTGTGTCTGAAGAGT 45.455 47.619 58.067 57.949 188 352 22 21
146 ACGGGATCAAGAGTTCATGAA TCTGCTCCTGTAATGACACTGT 42.857 45.455 57.019 59.1 181 326 21 22
131 AGTGATGACTCTAGTACGGGA GCAGTGCAAGAATCTGAGCC 47.619 55 57.072 59.549 166 296 21 20
179 GGGATCAAGAGTTCATGAATGCT CTGAAGTTTGGCATTCTGTGTC 43.478 45.455 58.794 58.106 183 361 23 22
174 TGACTCTAGTACGGGATCAAGAG GTGTCTGAAGAGTGGTATTCTGC 47.826 47.826 58.547 59.07 171 344 23 23
174 GTGATGACTCTAGTACGGGATCA CTGAAGAGTGGTATTCTGCTCC 47.826 50 58.865 58.209 167 340 23 22
126 TCCTTTGAAGATGTAAGTCCACA TGTGTCTCAAGTTGCTTCAGT 39.13 42.857 57.439 57.733 136 261 23 21
116 TCTAGTACGGGATCAAGAGTTCA CAAGAATCTGAGCCTGCAAATT 43.478 40.909 58.148 57.548 175 290 23 22
172 AAACATCCCCTCCTTTCCCC ACACATTCAACCGGCAAGAC 55 50 59.289 59.048 191 362 20 20
192 ACCAGGACTCATCACTCTCC GGGGAAAGGAGGGGATGTTT 55 55 58.141 59.289 19 210 20 20
195 GGACTCATCACTCTCCTAGGG GATTGGAGGGGAAAGGAGGG 57.143 60 58.407 59.447 23 217 21 20
118 AGGCATTGGAACTTTTCTCCT ACTGACTCCTCACTCATCACA 42.857 47.619 57.467 58.118 146 263 21 21
205 TGGAAAGATAGACCAGGACTCA GAGGGGAAAGGAGGGGATG 45.455 63.158 57.939 58.764 8 212 22 19
172 GGCATTGGAACTTTTCTCCTTTG CGTGTCAGATCTCATGGGC 43.478 57.895 58.69 58.017 147 318 23 19
127 CCTCATAAGTGGAGTTGTGTCAG GGGGATTGGAGGGGAAAGG 47.826 63.158 58.751 59.379 94 220 23 19
145 CATAAGTGGAGTTGTGTCAGAGA TCTAAATTTCAACAACCGAGCG 43.478 40.909 57.861 57.601 97 241 23 22
170 AGTGGAGTTGTGTCAGAGAATT GTCTTCTACTGACTCCTCACTCA 40.909 47.826 57.304 58.671 101 270 22 23
184 AGTTGTGTCAGAGAATTTAGGGA TCTGGTCTTCTACTATGTGGTCT 39.13 43.478 57.174 57.806 106 289 23 23
249 AGATAGACCAGGACTCATCACTC TGACTCCTCACTCATCACATTCT 47.826 43.478 58.53 58.908 13 261 23 23