Aliases rno_circRNA_006016 Scientific name Rattus rattus
Organism Rat Genome Locus chr16:4168225-4228688:+
CircRNA type sense Gene ID n/a
Gene Name NM_170787 Detection pipeline Microarray
Sample Type Kidney
Method for Estimation n/a
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer n/a
Reverse Primer n/a
Pubmed 28778982
Aliases rno_circRNA_006016 Scientific name Rattus rattus
Organism Rat Genome Locus chr16:4168225-4228688:+
CircRNA type sense Gene ID n/a
Gene Name NM_170787 Detection pipeline n/a
Sample Type Kidney
Method for Estimation Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer GTTTTGAGGGACAGGAAGCGTTAC
Reverse Primer ATGACTTCCTCCTGCGTCTTTTTC
Pubmed 28778982
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
218 ATGACGAGGAGGGCATATGG CCCACCTGCTGCTTTAACTG 55 55 59.02 59.116 135 352 20 20
220 CTTTCATTCTGGCGCTCCTC TGACTTCCTCCTGCGTCTTT 55 50 58.987 58.951 78 297 20 20
123 CTCCTCCTCTCTGTGCTCCT AGTAACGCTTCCTGTCCCTC 60 55 60.033 59.104 92 214 20 20
115 GTTTTGAGGGACAGGAAGCG AGTGCCATGACTTCCTCCTG 55 55 59.125 59.383 190 304 20 20
101 AGGATGACGAGGAGGGCATA TTTTCACTGATGGCCGCAAG 55 50 59.811 59.402 132 232 20 20
136 TCTTCTTTCATTCTGGCGCTC CGCTTCCTGTCCCTCAAAAC 47.619 55 58.649 59.125 74 209 21 20
207 CAGATTCGTGTGCCTTTCAG ATCCTTTTCACTGATGGCCG 50 50 57.111 58.245 30 236 20 20
140 CCGGGCCTGTAAACCAAAG CCATGACTTCCTCCTGCGT 57.895 57.895 58.737 59.401 161 300 19 19
173 TCGGTGTGACTAACCTTCTCT CACTGATGGCCGCAAGTAAC 47.619 55 58.127 59.552 56 228 21 20
112 ATAGCCGGGCCTGTAAACC GAGGCAGATAACTCCAGCAAG 57.895 52.381 59.47 58.441 157 268 19 21
189 ACTCCTCCTGAACAGCTGTC AAGGAAGGGGCCAAAGACTT 55 50 59.027 59.14 109 297 20 20
210 GAACAGCTGTCAGGAAAGCC gcagggGTTTGGATGACTTC 55 55 59.122 58.823 118 327 20 20
286 CATTCCACCCGTGTCAACTC ccttcatagcagggGTTTGG 55 55 58.843 58.232 50 335 20 20
176 CTCCATTCCACCCGTGTCAA TGGGGCCAATTTCATGTGAA 55 45 59.964 57.979 47 222 20 20
192 CCTTAACTCCTCCTGAACAGC GGAAGGGGCCAAAGACTTATC 52.381 52.381 58.021 58.344 104 295 21 21
325 TCCCAGACACAGCAGAGAATT tcatagcagggGTTTGGATGA 47.619 47.619 59.019 58.796 8 332 21 21
194 GACCCCTCCATTCCACCC TCATATCTTCTCTTGGGGCCA 66.667 47.619 58.992 58.225 42 235 18 21
140 CCAACTATGCCTGACAATGCA ATGGAAAGCAAGGAAGGGGC 47.619 55 58.906 60.616 167 306 21 20
179 AGCCAGAGGTGATATGAAGTGA ACTTCTATGGAAAGCAAGGAAGG 45.455 43.478 58.621 58.406 134 312 22 23
185 GGAAAGCCAGAGGTGATATGA TGACTTCTATGGAAAGCAAGGA 47.619 40.909 57.154 57.091 130 314 21 22