Aliases rnoCirc_009926 Scientific name Rattus rattus
Organism Rat Genome Locus chr5:154517886-154533005:+
CircRNA type n/a Gene ID n/a
Gene Name Eya3 Detection pipeline FindCirc
Sample Type Heart
Method for Estimation n/a
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer n/a
Reverse Primer n/a
Pubmed 27476877
Aliases rnoCirc_009926 Scientific name Rattus rattus
Organism Rat Genome Locus chr5:154517886-154533005:+
CircRNA type CDS:5UTR Gene ID n/a
Gene Name Eya3 Detection pipeline n/a
Sample Type heart
Method for Estimation Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer GGACTACCTCCTTTCGACAGTT
Reverse Primer GTCGCTCTGGTAGGTCTTGC
Pubmed 27476877
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
144 TCTCGGTTCCTGTTTCGGAA AGTCTCTGCGGTCTTCACAA 50 50 58.958 58.959 80 223 20 20
143 CACATCCTCTCGGTTCCTGT CGGTCTTCACAAACTGCGAA 55 50 59.102 59.066 73 215 20 20
155 GTCTCAACCCTACGCTGTCT GCTCTGGTAGGTCTTGCTCT 55 55 59.111 58.809 141 295 20 20
150 GGCAGACTCAGTACCAGACA CCGCTGTCTCTTTACACACA 55 50 58.742 57.851 113 262 20 20
119 CCACTTATCCTGGGCAGACT TCTGCGGTCTTCACAAACTG 55 50 58.792 58.418 101 219 20 20
156 TCAACCCTACGCTGTCTACC GGTCGCTCTGGTAGGTCTTG 55 60 58.82 59.826 144 299 20 20
151 TCCTCTCGGTTCCTGTTTCG TGCAAGTCTCTGCGGTCTT 55 52.632 59.398 59.252 77 227 20 19
106 ACCTCCTTTCGCAGTTTGTG CTCTGGTAGGTCTTGCTCTTCT 50 50 58.691 58.904 189 294 20 22
103 CTGGGCAGACTCAGTACCAG TCTTCACAAACTGCGAAAGGA 60 42.857 59.466 58.087 110 212 20 21
155 CTGCAGCAGTCTCAACCCTA AGGTCTTGCTCTTCTTCCATGA 55 45.455 59.39 59.091 133 287 20 22
155 ATCCTGGGCAGACTCAGTAC CGCTGTCTCTTTACACACACTT 55 45.455 58.509 58.876 107 261 20 22
143 CCCTACGCTGTCTACCCTCA GGTAGGTCTTGCTCTTCTTCC 60 52.381 60.395 57.746 148 290 20 21
105 GCAGTCTCAACCCTACGCT CTTATGTGACTGGACTGCAAGT 57.895 45.455 59.408 58.332 138 242 19 22
127 ACTTATCCTGGGCAGACTCAG ACTGCAAGTCTCTGCGGT 52.381 55.556 58.885 58.858 103 229 21 18
285 cgaccctagccTGAGTCTTT ATCACACCTGCAGCACTACT 55 50 58.813 59.02 7 291 20 20
257 ccaagtttgccatgacccat CACTCCATTTCCATGCACCC 50 55 58.731 59.18 96 352 20 20
224 gcaggggttggttcttttcc CGCTTTCCCACTCCATTTCC 55 55 59.32 59.189 137 360 20 20
168 cttgcaggggttggttcttt CCTCCCTGACATCACACCTG 50 60 58.587 59.749 134 301 20 20
198 tctctcctgtgggtcctagg TCCCACTCCATTTCCATGCA 60 50 59.368 59.297 158 355 20 20
125 gtggacccaagtttgccatg ACTGGCTATCTCAGAgtctgc 55 52.381 59.682 58.969 90 214 20 21
172 tcagaggacaacttgcaggg GACATCACACCTGCAGCAC 55 57.895 59.602 59.128 123 294 20 19
127 ggattgaacccagatcagcag GCCCTCCCTGACATCACAC 52.381 63.158 58.704 60.078 177 303 21 19
118 tgaacccagatcagcagacT CCCTGACATCACACCTGCAG 50 60 58.351 60.676 181 298 20 20
237 ttccttctctcctgtgggtc ATGCCAACCCTCACTCCAA 55 52.632 58.354 58.837 153 389 20 19
126 aggacaacttgcaggggtt ACAGGAAACCCAAGAGACTGA 52.632 47.619 59.069 58.591 127 252 19 21