Aliases rnoCirc_009927 Scientific name Rattus rattus
Organism Rat Genome Locus chr5:154517886-154540304:+
CircRNA type n/a Gene ID n/a
Gene Name Eya3 Detection pipeline FindCirc
Sample Type Heart
Method for Estimation n/a
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer n/a
Reverse Primer n/a
Pubmed 27476877
Aliases rnoCirc_009927 Scientific name Rattus rattus
Organism Rat Genome Locus chr5:154517886-154540304:+
CircRNA type CDS:5UTR Gene ID n/a
Gene Name Eya4 Detection pipeline n/a
Sample Type heart
Method for Estimation Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer TCTTACCCCATTCCAGACAGT
Reverse Primer GTCGCTCTGGTAGGTCTTGC
Pubmed 27476877
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
208 GCCCCGTGTGTTGTTTGTAA AGTCTCTGCGGTCTTCACAA 50 50 59.26 58.959 16 223 20 20
106 CCCCATTCCAGCAGTTTGTG CTCTGGTAGGTCTTGCTCTTCT 55 50 59.395 58.904 189 294 20 22
149 TTAACCACAAGCCAGCCAAG GGTCGCTCTGGTAGGTCTTG 50 60 58.673 59.826 151 299 20 20
100 CCATCTCCAAGTCAACACAGT CACAAACTGCTGGAATGGGG 47.619 55 57.868 59.395 109 208 21 20
140 ACACAGTGTTCTTACCTGCAC CCGCTGTCTCTTTACACACA 47.619 50 58.438 57.851 123 262 21 20
131 GCCAAGCCCAGCACATTATT GCTCTGGTAGGTCTTGCTCT 50 55 59.174 58.809 165 295 20 20
104 TCTTACCCCATTCCAGCAGT AGGTCTTGCTCTTCTTCCATGA 50 45.455 58.331 59.091 184 287 20 22
100 CCATTCCAGCAGTTTGTGAAGA GGTAGGTCTTGCTCTTCTTCC 45.455 52.381 59.113 57.746 191 290 22 21
205 GTGTTGTTTGTAATTGGTCCACT TGCAAGTCTCTGCGGTCTT 39.13 52.632 57.743 59.252 23 227 23 19
104 CAAGCCAGCCAAGCCCAG CGCTGTCTCTTTACACACACTT 66.667 45.455 61.379 58.876 158 261 18 22
208 CTCAGCCCCGTGTGTTGT TCTGCGGTCTTCACAAACTG 61.111 50 59.889 58.418 12 219 18 20
110 ACTCCATCTCCAAGTCAACAC CGGTCTTCACAAACTGCTGG 47.619 55 57.591 59.412 106 215 21 20
254 AAATAACGAACGGCAGCTCC CACTCCATTTCCATGCACCC 50 55 58.916 59.18 99 352 20 20
250 CCCAAAGTCCTGCCTTGAAC ATCACACCTGCAGCACTACT 55 50 59.038 59.02 42 291 20 20
196 CCCACCCCTCACACATGTTA CGCTTTCCCACTCCATTTCC 55 55 59.304 59.189 165 360 20 20
320 GTTTCACCCAAAGTCCTGCC TCCCACTCCATTTCCATGCA 55 50 59.326 59.297 36 355 20 20
136 CCAGAAAGCCTTGTCTTGGT ACAGGAAACCCAAGAGACTGA 50 47.619 58.013 58.591 117 252 20 21
116 ATGTTAGCTACGTCCCCAGC GACATCACACCTGCAGCAC 55 57.895 59.536 59.128 179 294 20 19
134 ACCCCTCACACATGTTAGCT CCTCCCTGACATCACACCTG 50 60 58.638 59.749 168 301 20 20
123 CACATGTTAGCTACGTCCCC CCCTGACATCACACCTGCAG 55 60 58.064 60.676 176 298 20 20
184 GAAAGCCTTGTCTTGGTGTGA GCCCTCCCTGACATCACAC 47.619 63.158 58.702 60.078 120 303 21 19