COVID-19 Technical Documents

Protocol for Assembly and Analysis of COVID-19 Genomes
Poojary et al (2020) Research Reports

Computational Analysis and Phylogenetic clustering of SARS-Cov-2 Genomes
Jolly et al (2021) Bio-Protocol

A distinct phylogenetic cluster of Indian SARS-CoV-2 isolates
Banu S, Jolly B, Mukherjee P et al (2020) Open Forum Infectious Diseases

High throughput detection and genetic epidemiology of SARS-CoV-2 using COVIDSeq next generation sequencing
Bhoyar RC, et al (2021) PLOS

Analysis of the potential impact of genomic variants in SARS-CoV-2 genomes from India on molecular diagnostic assays
Jain A, Rophina M, et al (2020) International Journal of Infectious Diseases

Initial insights into the genetic epidemiology of SARS-CoV-2 isolates from Kerala suggest local spread from limited introductions
Radhakrishnan C, Divakar MK, et al (2021) Frontiers in Genetics

Asymptomatic reinfection in two healthcare workers from India with genetically distinct SARS-CoV-2
Gupta V, Bhoyar RC, Jain A, Srivastava S, et al (2020) Clinical Infectious Diseases

Genetic epidemiology of variants associated with immune escape from global SARS-CoV-2 genomes
Jolly B, Rophina M, et al (2020) Preprint