Aliases cel_circ_0000040 Scientific name Caenorhabditis elegans
Organism Nematode Genome Locus chrI:2478227-2478800:-
CircRNA type n/a Gene ID n/a
Gene Name abtm-1 Detection pipeline n/a
Sample Type L4 larval stage
Method for Estimation Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer GTTGCGGAGCTCGTTGAATA
Reverse Primer ACTTCATCGTTGGCTCTGCT
Pubmed 29298683
Aliases cel_circ_0000040 Scientific name Caenorhabditis elegans
Organism Nematode Genome Locus chrI:2478227-2478800:-
CircRNA type n/a Gene ID WBGene00022281
Gene Name abtm-1 Detection pipeline find_circ
Sample Type L4 larval stage
Method for Estimation n/a
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer n/a
Reverse Primer n/a
Pubmed 29298683
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
308 GAGCAGAGCCAACGATGAAG CGCGCAAAACTCTATCCGAA 55 50 58.995 59.004 28 335 20 20
142 TCCAGCATCATTATCCGCCT TCCCGATCGATTTTCCTCCA 50 50 58.941 58.508 169 310 20 20
201 GAAATTGAGCAGAGCCAACG GAGGAACACGTGGAATGAGC 50 55 57.747 58.92 22 222 20 20
177 GCGAATCGATAGCCTTATTTCCA CTCTATCCGAAGCATTTCCCG 43.478 52.381 59.006 58.592 150 326 23 21
243 GAGTGAAATTGAGCAGAGCCA GAACCGTCAAACTGGAGCTC 47.619 55 58.57 58.851 18 260 21 20
164 TCGATCCGCTTCAAATTTCTCA CCGTCAAACTGGAGCTCTCT 40.909 55 58.405 59.394 94 257 22 20
144 GTTGATAAGCGAATCGATAGCCT ACTCTCTGGATCTCTCGTTCC 43.478 52.381 58.761 58.35 142 285 23 21
142 CGATAGCCTTATTTCCAGCATCA TCCTCCATCTTCACTCTCTGG 43.478 52.381 58.682 58.255 156 297 23 21
136 ATCGATAGCCTTATTTCCAGCA CTTCACTCTCTGGATCTCTCGT 40.909 50 57.376 58.721 154 289 22 22