Aliases hsa_circ_0001955 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr15:64495280-64508912:-
CircRNA type . Gene ID ENSG00000180357.9
Gene Name ZNF609 Detection pipeline .
Sample Type Hs68_RNase; Hs68_control; Nhek; K562; Helas3; Gm12878; Bj; Ag04450; A549; Sknshra
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases HSA_CIRCpedia_15143 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr15:64495280-64508912
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type HeLa_S3;AG04450;Liver_T11;Stomach;Cortex;Liver_N12;Parietal;GM12878;Liver_T13;Liver_T3;Liver_N7;SH-SY5Y_D0_exp2;Liver;Lung;K562;Liver_T15;Liver_N11;Forebrain;Liver_N14;Cerebellum;H9;Diencephalon;Temporal;PA1;Liver_T14;NHEK;A549;Liver_T12;Liver_N13;H1;Occipital;Hs68;Liver_T19;Liver_N19;Liver_T22;Liver_N20;Liver_T20;Liver_T21;Liver_N22;Liver_N17
Method for Estimation poly(A)-;Ribo-;RNaseR
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases hsa_circRNA_101555 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr15:64495280-64508912:-
CircRNA type exonic Gene ID ENSG00000180357.9
Gene Name ZNF609 Detection pipeline n/a
Sample Type Esophageal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases hsa_circ_101555/hsa_circ_0001955 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr15:64495280-64508912:-
CircRNA type N/A Gene ID ENSG00000180357.9
Gene Name ZNF609 Detection pipeline N/A
Sample Type Cutaneous Squamous Cell Carcinoma
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer GAGAAAGCCACACACATAGGG
Reverse Primer CGGTCACAGAGGTCAAACAAG
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
285 GATGGCCGATCCCTATGTGT TGTTTGACCTCTGTGACCGA 55 50 59.313 58.884 25 309 20 20
192 TGTGATGGCCGATCCCTATG CTGGTTCCTCAGCCCTACTC 55 60 59.313 59.173 22 213 20 20
346 AAGAGGCTGCTGTTGTGATG ATAATGCCATGGTGCTGGAG 50 50 58.469 58.009 9 354 20 20
113 GAGTAGGGCTGAGGAACCAG TTGACCTCTGTGACCGAACA 60 50 59.173 58.884 194 306 20 20
282 TGTGTGTGGCTTTCTCGAGT GCTTGGAGGACTTGTTTGACC 50 52.381 59.536 59.391 40 321 20 21
269 CCTATGTGTGTGGCTTTCTCG GACCTCTGTGACCGAACATTT 52.381 47.619 58.997 58.232 36 304 21 21
205 CGAAGAGGCTGCTGTTGTG GGTTCCTCAGCCCTACTCTAT 57.895 52.381 59.135 58.034 7 211 19 21
281 TCCCTATGTGTGTGGCTTTC GGACTTGTTTGACCTCTGTGAC 50 50 57.51 59.127 34 314 20 22
235 GCTGTTGTGATGGCCGATC GCTGGTAAGTTGGAATTGCTCT 57.895 45.455 59.276 58.915 17 251 19 22
311 GGCCGATCCCTATGTGTGTG GGAGCTCCTTGGCCCTAG 60 66.667 60.533 58.765 28 338 20 18
254 AACAGGTCCAACTTGATGCA GGTCTCCCACAGGTGTATTACT 45 50 57.637 58.895 141 394 20 22
234 TGCACCAGAATCTACGTGAAC CCTCTGTGACCGAACATTTACT 47.619 45.455 58.316 58.073 69 302 21 22
369 GTTGTGATGGCCGATCCCT CCACAGGTGTATTACTTTGGACC 57.895 47.826 59.775 58.992 20 388 19 23
200 TCTACGTGAACTGACCCTACTG GAAGACGGTGTTAATGATAGCCA 50 43.478 58.92 58.561 79 278 22 23
316 TGGCTTTCTCGAGTTATTGCAG GGGAAATATAATGCCATGGTGCT 45.455 43.478 58.997 59.166 46 361 22 23
279 CTGCTGTTGTGATGGCCG CCGAACATTTACTTTGAAGACGG 61.111 43.478 59.127 58.291 15 293 18 23
113 GAGTAGGGCTGAGGAACCAG TTGACCTCTGTGACCGAACA 60 50 59.173 58.884 194 306 20 20
285 GATGGCCGATCCCTATGTGT TGTTTGACCTCTGTGACCGA 55 50 59.313 58.884 25 309 20 20
346 AAGAGGCTGCTGTTGTGATG ATAATGCCATGGTGCTGGAG 50 50 58.469 58.009 9 354 20 20
282 TGTGTGTGGCTTTCTCGAGT GCTTGGAGGACTTGTTTGACC 50 52.381 59.536 59.391 40 321 20 21
192 TGTGATGGCCGATCCCTATG CTGGTTCCTCAGCCCTACTC 55 60 59.313 59.173 22 213 20 20
269 CCTATGTGTGTGGCTTTCTCG GACCTCTGTGACCGAACATTT 52.381 47.619 58.997 58.232 36 304 21 21
205 CGAAGAGGCTGCTGTTGTG GGTTCCTCAGCCCTACTCTAT 57.895 52.381 59.135 58.034 7 211 19 21
235 GCTGTTGTGATGGCCGATC GCTGGTAAGTTGGAATTGCTCT 57.895 45.455 59.276 58.915 17 251 19 22
254 AACAGGTCCAACTTGATGCA GGTCTCCCACAGGTGTATTACT 45 50 57.637 58.895 141 394 20 22
311 GGCCGATCCCTATGTGTGTG GGAGCTCCTTGGCCCTAG 60 66.667 60.533 58.765 28 338 20 18
281 TCCCTATGTGTGTGGCTTTC GGACTTGTTTGACCTCTGTGAC 50 50 57.51 59.127 34 314 20 22
234 TGCACCAGAATCTACGTGAAC CCTCTGTGACCGAACATTTACT 47.619 45.455 58.316 58.073 69 302 21 22
369 GTTGTGATGGCCGATCCCT CCACAGGTGTATTACTTTGGACC 57.895 47.826 59.775 58.992 20 388 19 23
200 TCTACGTGAACTGACCCTACTG GAAGACGGTGTTAATGATAGCCA 50 43.478 58.92 58.561 79 278 22 23
316 TGGCTTTCTCGAGTTATTGCAG GGGAAATATAATGCCATGGTGCT 45.455 43.478 58.997 59.166 46 361 22 23
279 CTGCTGTTGTGATGGCCG CCGAACATTTACTTTGAAGACGG 61.111 43.478 59.127 58.291 15 293 18 23
285 GATGGCCGATCCCTATGTGT TGTTTGACCTCTGTGACCGA 55 50 59.313 58.884 25 309 20 20
113 GAGTAGGGCTGAGGAACCAG TTGACCTCTGTGACCGAACA 60 50 59.173 58.884 194 306 20 20
346 AAGAGGCTGCTGTTGTGATG ATAATGCCATGGTGCTGGAG 50 50 58.469 58.009 9 354 20 20
192 TGTGATGGCCGATCCCTATG CTGGTTCCTCAGCCCTACTC 55 60 59.313 59.173 22 213 20 20
282 TGTGTGTGGCTTTCTCGAGT GCTTGGAGGACTTGTTTGACC 50 52.381 59.536 59.391 40 321 20 21
235 GCTGTTGTGATGGCCGATC GCTGGTAAGTTGGAATTGCTCT 57.895 45.455 59.276 58.915 17 251 19 22
269 CCTATGTGTGTGGCTTTCTCG GACCTCTGTGACCGAACATTT 52.381 47.619 58.997 58.232 36 304 21 21
205 CGAAGAGGCTGCTGTTGTG GGTTCCTCAGCCCTACTCTAT 57.895 52.381 59.135 58.034 7 211 19 21
281 TCCCTATGTGTGTGGCTTTC GGACTTGTTTGACCTCTGTGAC 50 50 57.51 59.127 34 314 20 22
254 AACAGGTCCAACTTGATGCA GGTCTCCCACAGGTGTATTACT 45 50 57.637 58.895 141 394 20 22
311 GGCCGATCCCTATGTGTGTG GGAGCTCCTTGGCCCTAG 60 66.667 60.533 58.765 28 338 20 18
234 TGCACCAGAATCTACGTGAAC CCTCTGTGACCGAACATTTACT 47.619 45.455 58.316 58.073 69 302 21 22
369 GTTGTGATGGCCGATCCCT CCACAGGTGTATTACTTTGGACC 57.895 47.826 59.775 58.992 20 388 19 23
316 TGGCTTTCTCGAGTTATTGCAG GGGAAATATAATGCCATGGTGCT 45.455 43.478 58.997 59.166 46 361 22 23
200 TCTACGTGAACTGACCCTACTG GAAGACGGTGTTAATGATAGCCA 50 43.478 58.92 58.561 79 278 22 23
279 CTGCTGTTGTGATGGCCG CCGAACATTTACTTTGAAGACGG 61.111 43.478 59.127 58.291 15 293 18 23
346 AAGAGGCTGCTGTTGTGATG ATAATGCCATGGTGCTGGAG 50 50 58.469 58.009 9 354 20 20
192 TGTGATGGCCGATCCCTATG CTGGTTCCTCAGCCCTACTC 55 60 59.313 59.173 22 213 20 20
113 GAGTAGGGCTGAGGAACCAG TTGACCTCTGTGACCGAACA 60 50 59.173 58.884 194 306 20 20
285 GATGGCCGATCCCTATGTGT TGTTTGACCTCTGTGACCGA 55 50 59.313 58.884 25 309 20 20
282 TGTGTGTGGCTTTCTCGAGT GCTTGGAGGACTTGTTTGACC 50 52.381 59.536 59.391 40 321 20 21
269 CCTATGTGTGTGGCTTTCTCG GACCTCTGTGACCGAACATTT 52.381 47.619 58.997 58.232 36 304 21 21
205 CGAAGAGGCTGCTGTTGTG GGTTCCTCAGCCCTACTCTAT 57.895 52.381 59.135 58.034 7 211 19 21
235 GCTGTTGTGATGGCCGATC GCTGGTAAGTTGGAATTGCTCT 57.895 45.455 59.276 58.915 17 251 19 22
254 AACAGGTCCAACTTGATGCA GGTCTCCCACAGGTGTATTACT 45 50 57.637 58.895 141 394 20 22
311 GGCCGATCCCTATGTGTGTG GGAGCTCCTTGGCCCTAG 60 66.667 60.533 58.765 28 338 20 18
234 TGCACCAGAATCTACGTGAAC CCTCTGTGACCGAACATTTACT 47.619 45.455 58.316 58.073 69 302 21 22
369 GTTGTGATGGCCGATCCCT CCACAGGTGTATTACTTTGGACC 57.895 47.826 59.775 58.992 20 388 19 23
281 TCCCTATGTGTGTGGCTTTC GGACTTGTTTGACCTCTGTGAC 50 50 57.51 59.127 34 314 20 22
316 TGGCTTTCTCGAGTTATTGCAG GGGAAATATAATGCCATGGTGCT 45.455 43.478 58.997 59.166 46 361 22 23
279 CTGCTGTTGTGATGGCCG CCGAACATTTACTTTGAAGACGG 61.111 43.478 59.127 58.291 15 293 18 23
200 TCTACGTGAACTGACCCTACTG GAAGACGGTGTTAATGATAGCCA 50 43.478 58.92 58.561 79 278 22 23