Aliases hsa_circ_0002161 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr16:11988810-11990642:-
CircRNA type . Gene ID ENSG00000048471.13
Gene Name SNX29 Detection pipeline .
Sample Type Hs68_RNase; Hs68_control
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25234927
Aliases HSA_CIRCpedia_16359 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr16:11988810-11990642
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type Temporal;Liver_N11;Liver_T12;Liver_T15;Liver_T10;Liver_N13;H9;Parietal;Liver_N3;SH-SY5Y_D4_exp1;Thyroid;Liver_N14;Cortex;PA1;Cerebellum;Liver_N12;Liver;Liver_T8;Liver_N15;Liver_N7;Liver_T3;Stomach;Liver_T14;Liver_T7;Occipital;Liver_N6;Hs68;Liver_N17;Liver_N20;Liver_N22;Liver_T17;Liver_T19;Liver_N21;Liver_N19
Method for Estimation Ribo-;poly(A)-;RNaseR
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 30172046
Aliases hsa_circ_0002161 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr16:11988810-11990642:-
CircRNA type N/A Gene ID ENSG00000048471.13
Gene Name SNX29 Detection pipeline N/A
Sample Type Essential hypertension
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer CGTAGATGCTGGCAAGTCAAC
Reverse Primer CCCTGGCTCTGCTTCACTTATT
Pubmed 29526758
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
334 CCTCCAATGGTTGACTTGCC TAAGTGAAGCAGAGCCAGGG 55 55 59.109 59.385 9 342 20 20
280 TGGTTGACTTGCCAGCATCT CCAGAGGAAAGTGCCCATGA 50 55 59.889 59.671 16 295 20 20
153 GCAAACAACAGCACCCTTTA ACCTAAGTCTGTGGTTGCAC 45 50 57.119 57.744 93 245 20 20
257 GGTTGACTTGCCAGCATCTAAA TGATGGAGGAGGAAGAGGAA 45.455 50 59.18 57.051 17 273 22 20
273 TGACTTGCCAGCATCTAAAAGT GAGGAAAGTGCCCATGAAATGA 40.909 45.455 58.245 58.908 20 292 22 22
200 ACAACAGCACCCTTTAACATACA GCCAGAGGAAAGTGCCCA 39.13 61.111 58.534 59.564 97 296 23 18
221 TGGCTAAATATGCAAACAACAGC AAGGCCGCCAGAGGAAAG 39.13 61.111 58.506 59.647 82 302 23 18
132 TTGGGGCATAAATCCTAGTTCA TGATGGAGGAGGAAGAGGAAATC 40.909 47.826 57.128 59.286 142 273 22 23
125 TCCTAGTTCATTACCCTTCTCCT TGAAATGATGGAGGAGGAAGAG 43.478 45.455 57.778 57.232 154 278 23 22
159 CAAACAACAGCACCCTTTAACA TCCCAAAACCTAAGTCTGTGGT 40.909 45.455 57.883 59.219 94 252 22 22
143 CTCCTTTTGAAAATGAGCCTCAA CTTGGGAGATGGAAGGCC 39.13 61.111 57.542 57.004 172 314 23 18
280 TGGTTGACTTGCCAGCATCT CCAGAGGAAAGTGCCCATGA 50 55 59.889 59.671 16 295 20 20
334 CCTCCAATGGTTGACTTGCC TAAGTGAAGCAGAGCCAGGG 55 55 59.109 59.385 9 342 20 20
153 GCAAACAACAGCACCCTTTA ACCTAAGTCTGTGGTTGCAC 45 50 57.119 57.744 93 245 20 20
273 TGACTTGCCAGCATCTAAAAGT GAGGAAAGTGCCCATGAAATGA 40.909 45.455 58.245 58.908 20 292 22 22
257 GGTTGACTTGCCAGCATCTAAA TGATGGAGGAGGAAGAGGAA 45.455 50 59.18 57.051 17 273 22 20
132 TTGGGGCATAAATCCTAGTTCA TGATGGAGGAGGAAGAGGAAATC 40.909 47.826 57.128 59.286 142 273 22 23
200 ACAACAGCACCCTTTAACATACA GCCAGAGGAAAGTGCCCA 39.13 61.111 58.534 59.564 97 296 23 18
221 TGGCTAAATATGCAAACAACAGC AAGGCCGCCAGAGGAAAG 39.13 61.111 58.506 59.647 82 302 23 18
159 CAAACAACAGCACCCTTTAACA TCCCAAAACCTAAGTCTGTGGT 40.909 45.455 57.883 59.219 94 252 22 22
125 TCCTAGTTCATTACCCTTCTCCT TGAAATGATGGAGGAGGAAGAG 43.478 45.455 57.778 57.232 154 278 23 22
143 CTCCTTTTGAAAATGAGCCTCAA CTTGGGAGATGGAAGGCC 39.13 61.111 57.542 57.004 172 314 23 18