Aliases hsa_circ_0003258 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr17:47388673-47389404:-
CircRNA type . Gene ID ENSG00000198740.4
Gene Name ZNF652 Detection pipeline .
Sample Type Hs68_RNase; Hs68_control; Nhek; K562; Hepg2; Helas3; H1hesc; Gm12878; Bj; Ag04450; A549; Nhlf; Sknshra
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25234927
Aliases HSA_CIRCpedia_21262 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr17:47388673-47389404
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type Liver_N15;SH-SY5Y_D4_exp2;Forebrain;PA1;Occipital;Liver_N14;SK_N_SH;Liver_T15;Liver_N10;Liver_N8;Liver_N6;SH-SY5Y_D2_exp1;Liver_T14;Heart;Liver_T7;Liver_T13;Liver_T11;Diencephalon;Liver_N7;SH-SY5Y_D0_exp1;Stomach;Liver_T10;BJ;Liver_T3;Liver_T6;HepG2;HeLa_S3;GM12878;A549;Thyroid;Liver_N13;Cortex;SH-SY5Y_D0_exp2;Liver_N11;K562;NHEK;Temporal;AG04450;Liver_T12;Parietal;H1;Liver_N12;Lung;Cerebellum;Liver_T8;Liver_N3;Liver;H9;Hs68;Liver_N19;Liver_T21;Liver_T17;Liver_N20;Liver_N21;Liver_T18;Liver_T22;Liver_N17;Liver_N18;Liver_T20;Liver_N22;Liver_T19
Method for Estimation Ribo-;RNaseR;poly(A)-
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 30172046
Aliases circ_009215 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr17:47388673-47389404:-
CircRNA type n/a Gene ID ENSG00000198740.4
Gene Name ZNF652 Detection pipeline Find_circ
Sample Type colorectal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25624062
Aliases hsa_circRNA_102116 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr17:47388673-47389404:-
CircRNA type exonic Gene ID ENSG00000198740.4
Gene Name ZNF652 Detection pipeline n/a
Sample Type Esophageal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 27465405
Aliases hsa_circ_0003258 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr17:47388673-47389404:n/a
CircRNA type n/a Gene ID NA
Gene Name NA Detection pipeline n/a
Sample Type cervical carcinoma
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 28080204
Aliases hsa_circRNA_102116/hsa_circ_0003258 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr17:47388673-47389404:-
CircRNA type N/A Gene ID ENSG00000198740.4
Gene Name ZNF652 Detection pipeline N/A
Sample Type Infantile Hemangioma (IH)
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer TGGTGTGGCAAGGATTTCAAC
Reverse Primer TTCGCATGTAAATGGCATGTCT
Pubmed 29095957
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
107 CGTCACAGTTCTGCATTGGA GTTTGCATAGATGGCGGACC 50 55 58.488 59.337 135 241 20 20
115 CCTTTCGTCACAGTTCTGCA AGTGTTTGCATAGATGGCGG 50 50 58.418 58.617 130 244 20 20
185 TGAAATCCTTGCCACACCAC GGACCAGTGAGAGAGAGGTG 50 60 58.673 58.818 42 226 20 20
207 TGTGTTCGTCGAAGTACTGC AGTGAGAGAGAGGTGTGCTG 50 55 58.238 58.744 15 221 20 20
150 CATGAACTGTTTGTGCCCAA GAGAGAGGTGTGCTGGACTC 45 60 57.113 59.47 67 216 20 20
155 TGTTTGTGCCCAATATGAATGC GCGGACCAGTGAGAGAGAG 40.909 63.158 58.141 59.193 74 228 22 19
141 GCTGGTACTTGTACTGAAACCT AGGGGCTAGTGTTTGCATAGA 45.455 47.619 57.996 58.803 111 251 22 21
245 AATCCTTGCCACACCACTGG TGCGAGGTAAGGAATGTGCT 55 50 60.54 59.387 45 289 20 20
287 AGTGTGTGTTTTCATGTGTTCG CGAGGTAAGGAATGTGCTACC 40.909 52.381 57.985 58.177 1 287 22 21
185 TGAAATCCTTGCCACACCAC GGACCAGTGAGAGAGAGGTG 50 60 58.673 58.818 42 226 20 20
107 CGTCACAGTTCTGCATTGGA GTTTGCATAGATGGCGGACC 50 55 58.488 59.337 135 241 20 20
207 TGTGTTCGTCGAAGTACTGC AGTGAGAGAGAGGTGTGCTG 50 55 58.238 58.744 15 221 20 20
115 CCTTTCGTCACAGTTCTGCA AGTGTTTGCATAGATGGCGG 50 50 58.418 58.617 130 244 20 20
245 AATCCTTGCCACACCACTGG TGCGAGGTAAGGAATGTGCT 55 50 60.54 59.387 45 289 20 20
155 TGTTTGTGCCCAATATGAATGC GCGGACCAGTGAGAGAGAG 40.909 63.158 58.141 59.193 74 228 22 19
150 CATGAACTGTTTGTGCCCAA GAGAGAGGTGTGCTGGACTC 45 60 57.113 59.47 67 216 20 20
141 GCTGGTACTTGTACTGAAACCT AGGGGCTAGTGTTTGCATAGA 45.455 47.619 57.996 58.803 111 251 22 21
287 AGTGTGTGTTTTCATGTGTTCG CGAGGTAAGGAATGTGCTACC 40.909 52.381 57.985 58.177 1 287 22 21
115 CCTTTCGTCACAGTTCTGCA AGTGTTTGCATAGATGGCGG 50 50 58.418 58.617 130 244 20 20
107 CGTCACAGTTCTGCATTGGA GTTTGCATAGATGGCGGACC 50 55 58.488 59.337 135 241 20 20
185 TGAAATCCTTGCCACACCAC GGACCAGTGAGAGAGAGGTG 50 60 58.673 58.818 42 226 20 20
207 TGTGTTCGTCGAAGTACTGC AGTGAGAGAGAGGTGTGCTG 50 55 58.238 58.744 15 221 20 20
150 CATGAACTGTTTGTGCCCAA GAGAGAGGTGTGCTGGACTC 45 60 57.113 59.47 67 216 20 20
155 TGTTTGTGCCCAATATGAATGC GCGGACCAGTGAGAGAGAG 40.909 63.158 58.141 59.193 74 228 22 19
245 AATCCTTGCCACACCACTGG TGCGAGGTAAGGAATGTGCT 55 50 60.54 59.387 45 289 20 20
141 GCTGGTACTTGTACTGAAACCT AGGGGCTAGTGTTTGCATAGA 45.455 47.619 57.996 58.803 111 251 22 21
287 AGTGTGTGTTTTCATGTGTTCG CGAGGTAAGGAATGTGCTACC 40.909 52.381 57.985 58.177 1 287 22 21
185 TGAAATCCTTGCCACACCAC GGACCAGTGAGAGAGAGGTG 50 60 58.673 58.818 42 226 20 20
107 CGTCACAGTTCTGCATTGGA GTTTGCATAGATGGCGGACC 50 55 58.488 59.337 135 241 20 20
245 AATCCTTGCCACACCACTGG TGCGAGGTAAGGAATGTGCT 55 50 60.54 59.387 45 289 20 20
150 CATGAACTGTTTGTGCCCAA GAGAGAGGTGTGCTGGACTC 45 60 57.113 59.47 67 216 20 20
141 GCTGGTACTTGTACTGAAACCT AGGGGCTAGTGTTTGCATAGA 45.455 47.619 57.996 58.803 111 251 22 21
155 TGTTTGTGCCCAATATGAATGC GCGGACCAGTGAGAGAGAG 40.909 63.158 58.141 59.193 74 228 22 19
115 CCTTTCGTCACAGTTCTGCA AGTGTTTGCATAGATGGCGG 50 50 58.418 58.617 130 244 20 20
287 AGTGTGTGTTTTCATGTGTTCG CGAGGTAAGGAATGTGCTACC 40.909 52.381 57.985 58.177 1 287 22 21
207 TGTGTTCGTCGAAGTACTGC AGTGAGAGAGAGGTGTGCTG 50 55 58.238 58.744 15 221 20 20