Aliases hsa_circ_0024108 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr11:102660640-102667893:-
CircRNA type . Gene ID ENSG00000196611.4;ENSG00000255282.2
Gene Name MMP1;WTAPP1 Detection pipeline .
Sample Type Nhek
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25234927
Aliases hsa_circ_0024108 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr11:102660640-102667893:-
CircRNA type N/A Gene ID ENSG00000196611.4;ENSG00000255282.2
Gene Name MMP1;WTAPP1 Detection pipeline N/A
Sample Type Hypopharyngeal Squamous Cell Carcinoma
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer GGTGGGGCCCATAAATAAAT
Reverse Primer AGGAGGAGTAGGGGATCGAG
Pubmed 28514762
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
113 TTCCTCCGGCAAAGACTCAT GCTCATCAGTGGCTATGCAC 50 55 59.016 59.057 131 243 20 20
145 TGTTTGTCACTGAAGCTGCC ACAGACATAAGAGGCCAGCC 50 55 58.976 59.456 182 326 20 20
112 GCTTTTCCTCCGGCAAAGAC TCAGTGGCTATGCACTCAAC 55 50 59.759 57.901 127 238 20 20
117 CTTGAGCTGCTTTTCCTCCG GTGGCTATGCACTCAACTGT 55 50 59.199 58.186 119 235 20 20
113 CACATGTGTTCTTGAGCTGCT AACTGTGTGGTGGGATCCC 47.619 57.895 59.122 59.232 109 221 21 19
153 TGTTCTTGAGCTGCTTTTCCT TGGGAGAAGTCAAATGGAGAGT 42.857 45.455 58.064 58.749 115 267 21 22
120 ACTGAAGCTGCCTGGGATC GCCACGCTATCCAGTCAA 57.895 55.556 59.393 57.067 190 309 19 18
148 TTGTCACTGAAGCTGCCTGG AAATACACAGACATAAGAGGCCA 55 39.13 60.536 57.564 185 332 20 23
116 GTGACACCAGTGACTGCA GATCCCAGGCAGCTTCAGT 55.556 57.895 57.145 59.393 93 208 18 19
138 CATGTGTTCTTGAGCTGCTTTT AGTATGCTCATCAGTGGCTATG 40.909 45.455 58.026 57.731 111 248 22 22
114 TGTCTCCTGTCTCTTTCTGTCT AGAAGTCAAATGGAGAGTATGCT 45.455 39.13 58.161 57.31 150 263 22 23
169 TTCCTCCGGCAAAGACTCAT AAGGTCTCTGAGGGTCAAGC 50 55 59.016 59.02 131 299 20 20
104 GCTTTTCCTCCGGCAAAGAC CTTAACCTCACCTTGCCCCT 55 55 59.759 59.301 127 230 20 20
116 CTTGAGCTGCTTTTCCTCCG GCACCTTAACCTCACCTTGC 55 55 59.199 59.118 119 234 20 20
107 CACATGTGTTCTTGAGCTGCT CCCCTAGATCTCGTAGCAGC 47.619 60 59.122 59.115 109 215 21 20
173 TGTCACTGAAGCTGCTACGA ACCATGCCATTGAGAAAGCC 50 50 59.041 58.811 186 358 20 20
138 TGTTTGTCACTGAAGCTGCT TCACACCTCTGACATTCACCA 45 47.619 57.957 58.954 182 319 20 21
112 CATGTGTTCTTGAGCTGCTTTT CACCTTGCCCCTAGATCTCG 40.909 60 58.026 59.609 111 222 22 20
112 TGTCTCCTGTCTCTTTCTGTCT TGTCAGGGGAGGTAAGTTCT 45.455 50 58.161 57.284 150 261 22 20
150 AGAGTTATCCCTTGCCTATCCA TTGCCCCTAGATCTCGTAGC 45.455 55 58.058 58.671 69 218 22 20
128 TCACTGAAGCTGCTACGAGAT ACCTCTGACATTCACCAAGGT 47.619 47.619 58.905 58.942 188 315 21 21
111 TGTTCTTGAGCTGCTTTTCCT CCTCACCTTGCCCCTAGATC 42.857 60 58.064 59.238 115 225 21 20