Aliases hsa_circ_0001141 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr20:33001547-33037285:+
CircRNA type . Gene ID ENSG00000167098.11
Gene Name SUN5 Detection pipeline .
Sample Type cd_19; K562; Helas3
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25234927
Aliases HSA_CIRCpedia_95702 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr20:33001547-33037285
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type Liver_T7;Diencephalon;Heart;Liver_N7;Parietal;Liver;Liver_N13;SH-SY5Y_D4_exp2;Occipital;Cerebellum;Temporal;Cortex;Hs68;Liver_N19;Liver_T21;Liver_N21
Method for Estimation Ribo-;RNaseR
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 30172046
Aliases cir-ITCH Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr20:33001547-33037285:+
CircRNA type N/A Gene ID ENSG00000167098.11
Gene Name SUN5 Detection pipeline N/A
Sample Type Colorectal cancer
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer GCAGAGGCCAACACTGGAA
Reverse Primer TCCTTGAAGCTGACTACGCTGAG
Pubmed 26110611
Aliases Cir-ITCH Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr20:33001547-33037285:+
CircRNA type N/A Gene ID ENSG00000167098.11
Gene Name SUN5 Detection pipeline N/A
Sample Type Esophageal cancer
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer GCAGAGGCCAACACTGGAA
Reverse Primer TCCTTGAAGCTGACTACGCTGAG
Pubmed 25749389
Aliases Cir-ITCH/hsa_circ_0001141 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr20:33001547-33037285:+
CircRNA type N/A Gene ID ENSG00000167098.11
Gene Name SUN5 Detection pipeline N/A
Sample Type Bladder cancer
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer AGCAATGCAGCAGTTT
Reverse Primer TGTAGCCCATCAAGACA
Pubmed 29386015
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
204 GCCAGGGAAGGGAAATCAGA GCTCTTTGTCACCTCCAAGC 55 55 59.374 59.122 41 244 20 20
214 ATACATTGCCAGGGAAGGGA TTGGCTCTTTGTCACCTCCA 50 50 58.393 59.157 34 247 20 20
189 AGGGAAGGGAAATCAGAACTCA CTCCAAGCTGCAAAGTCACA 45.455 50 58.74 58.688 44 232 22 20
120 CTCTTGGTCCATTGCCACCT ACTGTAGCCCATCAAGACAAA 55 42.857 59.961 57.212 173 292 20 21
175 ACTCATAAGCTTGCTGTCAGA CACCTCCAAGCTGCAAAGTC 42.857 55 57.031 59.405 61 235 21 20
174 AGCTTGCTGTCAGATAAGTTGT CTTTGTCACCTCCAAGCTGC 40.909 55 57.987 59.405 68 241 22 20
190 AGGGAAATCAGAACTCATAAGCT TGTCACCTCCAAGCTGCAAA 39.13 50 57.293 60.107 49 238 23 20
223 GTGTTATACATTGCCAGGGAAG TCTGTTGGCTCTTTGTCACC 45.455 50 57.099 58.033 29 251 22 20
111 CCTGGATGGGTTGAAGAAGT AGACTCTAACTGTAGCCCATCA 50 45.455 57.113 58.017 190 300 20 22
101 CTGGATGGGTTGAAGAAGTAGT CTGTAGCCCATCAAGACAAATTG 45.455 43.478 57.44 58.01 191 291 22 23
204 GCCAGGGAAGGGAAATCAGA GCTCTTTGTCACCTCCAAGC 55 55 59.374 59.122 41 244 20 20
214 ATACATTGCCAGGGAAGGGA TTGGCTCTTTGTCACCTCCA 50 50 58.393 59.157 34 247 20 20
189 AGGGAAGGGAAATCAGAACTCA CTCCAAGCTGCAAAGTCACA 45.455 50 58.74 58.688 44 232 22 20
120 CTCTTGGTCCATTGCCACCT ACTGTAGCCCATCAAGACAAA 55 42.857 59.961 57.212 173 292 20 21
174 AGCTTGCTGTCAGATAAGTTGT CTTTGTCACCTCCAAGCTGC 40.909 55 57.987 59.405 68 241 22 20
223 GTGTTATACATTGCCAGGGAAG TCTGTTGGCTCTTTGTCACC 45.455 50 57.099 58.033 29 251 22 20
190 AGGGAAATCAGAACTCATAAGCT TGTCACCTCCAAGCTGCAAA 39.13 50 57.293 60.107 49 238 23 20
175 ACTCATAAGCTTGCTGTCAGA CACCTCCAAGCTGCAAAGTC 42.857 55 57.031 59.405 61 235 21 20
111 CCTGGATGGGTTGAAGAAGT AGACTCTAACTGTAGCCCATCA 50 45.455 57.113 58.017 190 300 20 22
101 CTGGATGGGTTGAAGAAGTAGT CTGTAGCCCATCAAGACAAATTG 45.455 43.478 57.44 58.01 191 291 22 23