Aliases hsa_circ_0004771 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr21:16386664-16415895:-
CircRNA type . Gene ID ENSG00000180530.5
Gene Name NRIP1 Detection pipeline .
Sample Type Hs68_RNase; Hs68_control; Nhek; K562; Huvec; Hepg2; Helas3; H1hesc; Gm12878; Bj; Ag04450; A549; Sknshra; Mcf7
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases HSA_CIRCpedia_35058 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr21:16386664-16415895
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type HepG2;Liver_T15;K562;Liver_N15;Heart;HUVEC;Liver_N13;Liver_N10;Liver_N6;Forebrain;Cerebellum;H9;GM12878;Liver_T14;PA1;Diencephalon;Liver_N7;Thyroid;H1;Liver_T3;Liver;Parietal;Temporal;NHEK;Liver_T8;Liver_T12;HeLa_S3;Kidney;Stomach;Lung;Occipital;Liver_N8;Liver_N11;Liver_N14;BJ;Liver_T7;AG04450;Liver_T10;Cortex;Liver_T13;A549;Liver_N12;Liver_T11;Liver_N3;Liver_T6;Hs68;Liver_T19;Liver_N18;Liver_N22;Liver_N21;Liver_T20;Liver_T21;Liver_T17;Liver_N19;Liver_N20;Liver_N17;Liver_T18;Liver_T22
Method for Estimation poly(A)-;Ribo-;RNaseR
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases circ_003218 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr21:16386664-16415895:-
CircRNA type n/a Gene ID ENSG00000180530.5
Gene Name NRIP1 Detection pipeline Find_circ
Sample Type colorectal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases hsa_circRNA_103110 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr21:16386664-16415895:-
CircRNA type exonic Gene ID ENSG00000180530.5
Gene Name NRIP1 Detection pipeline n/a
Sample Type Esophageal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases hsa_circ_103110/hsa_circ_0004771 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr21:16386664-16415895:-
CircRNA type N/A Gene ID ENSG00000180530.5
Gene Name NRIP1 Detection pipeline N/A
Sample Type breast cancer
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer CCGGATGACATCAGAGCTACT
Reverse Primer ACACTTCCGTCTGTCTCCAA
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
292 CATCTGCGGCTTCAACAGA TGTCTCATTGCCCCACTTTT 52.632 45 58.155 57.62 17 308 19 20
189 cagtctcgctctgttgtcca TCTTTTGTCTCATTGCCCCAC 55 47.619 59.685 58.761 125 313 20 21
160 acctctgccttccaagttcT TGGGAGAAACACAGCCAGAA 50 50 58.56 59.157 181 340 20 20
130 caacctctgccttccaagt TGTCTCATTGCCCCACTTTTAAA 52.632 39.13 57.266 58.781 179 308 19 23
176 ACAGAAGTTAGTATCCTTGCTCG TGGATAAgaacttggaaggcag 43.478 45.455 58 58.045 31 206 23 22
133 ctgccttccaagttcTTATCCA ATTGTCTTTTGTCTCATTGCCC 45.455 40.909 58.045 57.474 185 317 22 22
219 CCCTGTCCTCCTTCAGTCAA TCTTTTGTCTCATTGCCCCAC 55 47.619 58.648 58.761 95 313 20 21
208 CCTCCTTCAGTCAAGTGTGC TGTCTCATTGCCCCACTTTT 55 45 58.483 57.62 101 308 20 20
341 CGTCTGTCTCCAAGCTCTGA TGGGAGAAACACAGCCAGAA 55 50 59.115 59.157 0 340 20 20
247 AGTAGCTCTGATGTCATCCGG TGTCTCATTGCCCCACTTTTAAA 52.381 39.13 59.04 58.781 62 308 21 23
227 GATTCCCTGTCCTCCTTCAGT ATTGTCTTTTGTCTCATTGCCC 52.381 40.909 58.808 57.474 91 317 21 22
179 TGTCATCCGGAGTCTTCAGA AGACTGTTATGCCACATTTTGTT 50 34.783 57.784 57.21 73 251 20 23
219 CCCTGTCCTCCTTCAGTCAA TCTTTTGTCTCATTGCCCCAC 55 47.619 58.648 58.761 95 313 20 21
208 CCTCCTTCAGTCAAGTGTGC TGTCTCATTGCCCCACTTTT 55 45 58.483 57.62 101 308 20 20
341 CGTCTGTCTCCAAGCTCTGA TGGGAGAAACACAGCCAGAA 55 50 59.115 59.157 0 340 20 20
247 AGTAGCTCTGATGTCATCCGG TGTCTCATTGCCCCACTTTTAAA 52.381 39.13 59.04 58.781 62 308 21 23
227 GATTCCCTGTCCTCCTTCAGT ATTGTCTTTTGTCTCATTGCCC 52.381 40.909 58.808 57.474 91 317 21 22
179 TGTCATCCGGAGTCTTCAGA AGACTGTTATGCCACATTTTGTT 50 34.783 57.784 57.21 73 251 20 23
341 CGTCTGTCTCCAAGCTCTGA TGGGAGAAACACAGCCAGAA 55 50 59.115 59.157 0 340 20 20
219 CCCTGTCCTCCTTCAGTCAA TCTTTTGTCTCATTGCCCCAC 55 47.619 58.648 58.761 95 313 20 21
247 AGTAGCTCTGATGTCATCCGG TGTCTCATTGCCCCACTTTTAAA 52.381 39.13 59.04 58.781 62 308 21 23
208 CCTCCTTCAGTCAAGTGTGC TGTCTCATTGCCCCACTTTT 55 45 58.483 57.62 101 308 20 20
227 GATTCCCTGTCCTCCTTCAGT ATTGTCTTTTGTCTCATTGCCC 52.381 40.909 58.808 57.474 91 317 21 22
179 TGTCATCCGGAGTCTTCAGA AGACTGTTATGCCACATTTTGTT 50 34.783 57.784 57.21 73 251 20 23