Aliases hsa_circ_0056731 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr2:152698416-152717334:-
CircRNA type . Gene ID ENSG00000196504.16
Gene Name PRPF40A Detection pipeline .
Sample Type Hepg2; Sknshra
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases HSA_CIRCpedia_38118 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr2:152698416-152717334
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type HepG2;Occipital;Temporal;Cerebellum;Diencephalon;Cortex;Parietal;Liver_T17
Method for Estimation poly(A)-;Ribo-
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases hsa_circ_0024892 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr2:152698416-152717334:-
CircRNA type N/A Gene ID ENSG00000196504.16
Gene Name PRPF40A Detection pipeline N/A
Sample Type Multiple sclerosis
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer GGGGTCTAGTCCTGGAGTCAC
Reverse Primer GCTCAGCCGGCATTTG
Aliases hsa_circ_0056731 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr2:152698416-152717334:-
CircRNA type N/A Gene ID ENSG00000196504.16
Gene Name PRPF40A Detection pipeline N/A
Sample Type Multiple sclerosis
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer ACGGCACTCTCACCATATCC
Reverse Primer TTGCTGGGATTATTTAGGACAGA
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
300 GTGTGCTACTGGTTGTGTGG CATAATCTTCGCTGGCCACC 55 55 59.056 59.053 77 376 20 20
311 TCATGGGTGTGCTACTGGTT GTCGCCATAATCTTCGCTGG 50 55 58.936 59.138 71 381 20 20
259 TGGGATATGGTGAGAGTGCC AGCCGCTGACCCCTAATTAC 55 55 58.868 59.531 20 278 20 20
339 CCCAAATTCCTTCCCAGCAG AGTGTCGCCATAATCTTCGC 55 50 58.811 58.428 46 384 20 20
348 GAGCCCAAATTCCTTCCCAG GGCAAGAGTGTCGCCATAAT 55 50 58.521 58.332 43 390 20 20
311 ATATGGTGAGAGTGCCGTGG AGGCTTCTTCCTCTTCCACA 55 50 59.534 58.265 24 334 20 20
103 CACATGCATCCTCAAGCTGA AGCCATAATCTCCTCCAGCT 50 50 58.254 57.885 137 239 20 20
190 GGGTCATGGGTGTGCTACT GGAGACAGGAAGAAAATCAGCC 57.895 50 59.009 58.987 68 257 19 22
165 TGGGTGTGCTACTGGTTGTG GCCATAATCTCCTCCAGCTTTG 55 50 60.179 59.117 74 238 20 22
151 TGCTACTGGTTGTGTGGGTG CTCCTCCAGCTTTGATTGTGA 55 47.619 60.179 57.936 80 230 20 21
213 TGTTCACATGCATCCTCAAGC CTCATTGATCCAGGCTTCTTCC 47.619 50 59.186 58.787 133 345 21 22
167 ACATGCATCCTCAAGCTGATTT ACTGCTGATATTCCAAGGACTCT 40.909 43.478 58.637 58.963 138 304 22 23
242 GGTACTCCCCTAGATGTTCACA CACCAGGGTCATTTTCTCATTGA 50 43.478 58.628 58.919 119 360 22 23
244 GTGTGCTACTGGTTGTGTGG ATTGAACGTTCGAACACCCG 55 50 59.056 59.137 77 320 20 20
183 TCATGGGTGTGCTACTGGTT CTTACAGACCGGGCTGACA 50 57.895 58.936 59.028 71 253 20 19
263 GAGCCCAAATTCCTTCCCAG ACCCGGTCCAGCTTAGGTAA 55 55 58.521 60.252 43 305 20 20
285 ATATGGTGAGAGTGCCGTGG AACACCCGGTCCAGCTTAG 55 57.895 59.534 59.322 24 308 20 19
115 CACATGCATCCTCAAGCTGA TACAGACCGGGCTGACACAT 50 55 58.254 60.903 137 251 20 20
245 GGGTCATGGGTGTGCTACT TTCGAACACCCGGTCCAG 57.895 61.111 59.009 59.262 68 312 19 18
367 TGCTGTGGGATATGGTGAGA GACAGCTGACATTTCTCTTGCT 50 45.455 58.122 58.927 15 381 20 22
177 TGCTACTGGTTGTGTGGGTG GTGCTTACAGACCGGGCT 55 61.111 60.179 59.337 80 256 20 18
244 TGGGTGTGCTACTGGTTGTG GAACGTTCGAACACCCGGTC 55 60 60.179 61.552 74 317 20 20
223 TGTTCACATGCATCCTCAAGC GGTCTGTCCTAAATAATCCCAGC 47.619 47.826 59.186 58.61 133 355 21 23
109 ACATGCATCCTCAAGCTGATTT ACCGGGCTGACACATGGT 40.909 61.111 58.637 61.249 138 246 22 18
209 GGTACTCCCCTAGATGTTCACA AGCAATAATTGAACGTTCGAACA 50 34.783 58.628 57.649 119 327 22 23
190 TGCATCCTCAAGCTGATTTTCA GAGAGCAATAATTGAACGTTCGA 40.909 39.13 58.576 57.55 141 330 22 23