Aliases hsa_circ_0058058 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr2:216177220-216190861:+
CircRNA type . Gene ID ENSG00000079246.15
Gene Name XRCC5 Detection pipeline .
Sample Type Hepg2; H1hesc; Gm12878; A549; Mcf7
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25234927
Aliases HSA_CIRCpedia_39572 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr2:216177220-216190861
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type K562;H9;H1;A549;HepG2;GM12878;Hs68
Method for Estimation poly(A)-;RNaseR;Ribo-
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 30172046
Aliases hsa_circRNA_102913 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr2:216177220-216190861:+
CircRNA type exonic Gene ID ENSG00000079246.15
Gene Name XRCC5 Detection pipeline n/a
Sample Type Esophageal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 27465405
Aliases hsa_circ_0058058 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr2:216177220-216190861:+
CircRNA type N/A Gene ID ENSG00000079246.15
Gene Name XRCC5 Detection pipeline N/A
Sample Type Acute Myeloid Leukemia
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer GGTGGTGTCCACGGAGAT
Reverse Primer CCAAGAGCGGTCAGGTTT
Pubmed 28282919
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
138 GACTAGACGCCAGTTAGCCT ACGTCCAGTTGCGGATAATG 55 50 58.895 58.348 175 312 20 20
129 GACGCCAGTTAGCCTTGAAG CCAGTTGCGGATAATGAGCG 55 55 58.92 59.417 180 308 20 20
132 AGGACTATGTGGTGGTGTCC GTTCGCTTCTTCCTTCGTCA 55 50 58.723 58.22 114 245 20 20
101 CCAGAGGACTATGTGGTGGT CAGGGACATTGCTTCAAGGC 55 55 58.427 59.471 110 210 20 20
106 GAGATGCAGAGCTCCGAGAG CGCTTCTTCCTTCGTCATGA 60 50 59.688 58.004 137 242 20 20
113 GCCTTGAAGCAATGTCCCTG TGCGGATAATGAGCGAATGT 55 45 59.471 57.761 191 303 20 20
103 TGAACCAGAGGACTATGTGGT GGGACATTGCTTCAAGGCTAA 47.619 47.619 58.097 58.554 106 208 21 21
174 TGTCCACGGAGATGCAGAG GCGGATAATGAGCGAATGTTTG 57.895 45.455 59.107 58.708 129 302 19 22
138 CCACGGAGATGCAGAGCTC CGATTTGGAAGTCAGAGGAACG 63.158 50 60.227 59.332 132 269 19 22
139 GGTGTCCACGGAGATGCA TTGGAAGTCAGAGGAACGAAG 61.111 47.619 59.337 57.613 127 265 18 21
157 GACGCCAGTTAGCCTTGAAG TATGCCTTACCTGACTGCCA 55 50 58.92 58.421 180 336 20 20
119 AGGACTATGTGGTGGTGTCC CAAGGCCGGTTTTGTCAGAG 55 55 58.723 59.407 114 232 20 20
148 CCAGAGGACTATGTGGTGGT GCGGTCAGGTTTCTTGCAAA 55 50 58.427 59.616 110 257 20 20
138 GACTAGACGCCAGTTAGCCT AGCATCCCTGAGAGCTTTTG 55 50 58.895 57.874 175 312 20 20
125 GAGATGCAGAGCTCCGAGAG AAGAGCGGTCAGGTTTCTTG 60 50 59.688 58.116 137 261 20 20
150 TGTCCACGGAGATGCAGAG GCGACCAGATTCAAACCAAGA 57.895 47.619 59.107 58.849 129 278 19 21
103 CCAGTTAGCCTTGAAGCCTT CTCCGGAAGCGACCAGATT 50 57.895 57.793 59.482 184 286 20 19
170 TGAACCAGAGGACTATGTGGT ACCAGATTCAAACCAAGAGCG 47.619 47.619 58.097 58.846 106 275 21 21
162 TGTGTGAACCAGAGGACTATGT CCAAGAGCGGTCAGGTTTC 45.455 57.895 58.761 58.455 102 263 22 19
149 CCACGGAGATGCAGAGCTC AAGCGACCAGATTCAAACCA 63.158 45 60.227 57.73 132 280 19 20
130 GGTGTCCACGGAGATGCA CGGTCAGGTTTCTTGCAAATTC 61.111 45.455 59.337 58.691 127 256 18 22
115 CCAGTTAGCCTTGAAGCCTTATT CTTTTGCAGTCCCTCCGG 43.478 61.111 58.727 58.013 184 298 23 18
157 GACGCCAGTTAGCCTTGAAG TATGCCTTACCTGACTGCCA 55 50 58.92 58.421 180 336 20 20
119 AGGACTATGTGGTGGTGTCC CAAGGCCGGTTTTGTCAGAG 55 55 58.723 59.407 114 232 20 20
148 CCAGAGGACTATGTGGTGGT GCGGTCAGGTTTCTTGCAAA 55 50 58.427 59.616 110 257 20 20
138 GACTAGACGCCAGTTAGCCT AGCATCCCTGAGAGCTTTTG 55 50 58.895 57.874 175 312 20 20
125 GAGATGCAGAGCTCCGAGAG AAGAGCGGTCAGGTTTCTTG 60 50 59.688 58.116 137 261 20 20
150 TGTCCACGGAGATGCAGAG GCGACCAGATTCAAACCAAGA 57.895 47.619 59.107 58.849 129 278 19 21
103 CCAGTTAGCCTTGAAGCCTT CTCCGGAAGCGACCAGATT 50 57.895 57.793 59.482 184 286 20 19
170 TGAACCAGAGGACTATGTGGT ACCAGATTCAAACCAAGAGCG 47.619 47.619 58.097 58.846 106 275 21 21
149 CCACGGAGATGCAGAGCTC AAGCGACCAGATTCAAACCA 63.158 45 60.227 57.73 132 280 19 20
162 TGTGTGAACCAGAGGACTATGT CCAAGAGCGGTCAGGTTTC 45.455 57.895 58.761 58.455 102 263 22 19
130 GGTGTCCACGGAGATGCA CGGTCAGGTTTCTTGCAAATTC 61.111 45.455 59.337 58.691 127 256 18 22
115 CCAGTTAGCCTTGAAGCCTTATT CTTTTGCAGTCCCTCCGG 43.478 61.111 58.727 58.013 184 298 23 18
157 GACGCCAGTTAGCCTTGAAG TATGCCTTACCTGACTGCCA 55 50 58.92 58.421 180 336 20 20
148 CCAGAGGACTATGTGGTGGT GCGGTCAGGTTTCTTGCAAA 55 50 58.427 59.616 110 257 20 20
119 AGGACTATGTGGTGGTGTCC CAAGGCCGGTTTTGTCAGAG 55 55 58.723 59.407 114 232 20 20
149 CCACGGAGATGCAGAGCTC AAGCGACCAGATTCAAACCA 63.158 45 60.227 57.73 132 280 19 20
150 TGTCCACGGAGATGCAGAG GCGACCAGATTCAAACCAAGA 57.895 47.619 59.107 58.849 129 278 19 21
138 GACTAGACGCCAGTTAGCCT AGCATCCCTGAGAGCTTTTG 55 50 58.895 57.874 175 312 20 20
125 GAGATGCAGAGCTCCGAGAG AAGAGCGGTCAGGTTTCTTG 60 50 59.688 58.116 137 261 20 20
103 CCAGTTAGCCTTGAAGCCTT CTCCGGAAGCGACCAGATT 50 57.895 57.793 59.482 184 286 20 19
170 TGAACCAGAGGACTATGTGGT ACCAGATTCAAACCAAGAGCG 47.619 47.619 58.097 58.846 106 275 21 21
162 TGTGTGAACCAGAGGACTATGT CCAAGAGCGGTCAGGTTTC 45.455 57.895 58.761 58.455 102 263 22 19
130 GGTGTCCACGGAGATGCA CGGTCAGGTTTCTTGCAAATTC 61.111 45.455 59.337 58.691 127 256 18 22
115 CCAGTTAGCCTTGAAGCCTTATT CTTTTGCAGTCCCTCCGG 43.478 61.111 58.727 58.013 184 298 23 18
157 GACGCCAGTTAGCCTTGAAG TATGCCTTACCTGACTGCCA 55 50 58.92 58.421 180 336 20 20
138 GACTAGACGCCAGTTAGCCT AGCATCCCTGAGAGCTTTTG 55 50 58.895 57.874 175 312 20 20
125 GAGATGCAGAGCTCCGAGAG AAGAGCGGTCAGGTTTCTTG 60 50 59.688 58.116 137 261 20 20
148 CCAGAGGACTATGTGGTGGT GCGGTCAGGTTTCTTGCAAA 55 50 58.427 59.616 110 257 20 20
119 AGGACTATGTGGTGGTGTCC CAAGGCCGGTTTTGTCAGAG 55 55 58.723 59.407 114 232 20 20
150 TGTCCACGGAGATGCAGAG GCGACCAGATTCAAACCAAGA 57.895 47.619 59.107 58.849 129 278 19 21
103 CCAGTTAGCCTTGAAGCCTT CTCCGGAAGCGACCAGATT 50 57.895 57.793 59.482 184 286 20 19
170 TGAACCAGAGGACTATGTGGT ACCAGATTCAAACCAAGAGCG 47.619 47.619 58.097 58.846 106 275 21 21
130 GGTGTCCACGGAGATGCA CGGTCAGGTTTCTTGCAAATTC 61.111 45.455 59.337 58.691 127 256 18 22
149 CCACGGAGATGCAGAGCTC AAGCGACCAGATTCAAACCA 63.158 45 60.227 57.73 132 280 19 20
162 TGTGTGAACCAGAGGACTATGT CCAAGAGCGGTCAGGTTTC 45.455 57.895 58.761 58.455 102 263 22 19
115 CCAGTTAGCCTTGAAGCCTTATT CTTTTGCAGTCCCTCCGG 43.478 61.111 58.727 58.013 184 298 23 18
157 GACGCCAGTTAGCCTTGAAG TATGCCTTACCTGACTGCCA 55 50 58.92 58.421 180 336 20 20
125 GAGATGCAGAGCTCCGAGAG AAGAGCGGTCAGGTTTCTTG 60 50 59.688 58.116 137 261 20 20
119 AGGACTATGTGGTGGTGTCC CAAGGCCGGTTTTGTCAGAG 55 55 58.723 59.407 114 232 20 20
138 GACTAGACGCCAGTTAGCCT AGCATCCCTGAGAGCTTTTG 55 50 58.895 57.874 175 312 20 20
148 CCAGAGGACTATGTGGTGGT GCGGTCAGGTTTCTTGCAAA 55 50 58.427 59.616 110 257 20 20
103 CCAGTTAGCCTTGAAGCCTT CTCCGGAAGCGACCAGATT 50 57.895 57.793 59.482 184 286 20 19
170 TGAACCAGAGGACTATGTGGT ACCAGATTCAAACCAAGAGCG 47.619 47.619 58.097 58.846 106 275 21 21
150 TGTCCACGGAGATGCAGAG GCGACCAGATTCAAACCAAGA 57.895 47.619 59.107 58.849 129 278 19 21
149 CCACGGAGATGCAGAGCTC AAGCGACCAGATTCAAACCA 63.158 45 60.227 57.73 132 280 19 20
162 TGTGTGAACCAGAGGACTATGT CCAAGAGCGGTCAGGTTTC 45.455 57.895 58.761 58.455 102 263 22 19
115 CCAGTTAGCCTTGAAGCCTTATT CTTTTGCAGTCCCTCCGG 43.478 61.111 58.727 58.013 184 298 23 18
130 GGTGTCCACGGAGATGCA CGGTCAGGTTTCTTGCAAATTC 61.111 45.455 59.337 58.691 127 256 18 22