Aliases hsa_circ_0058107 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr2:216246934-216256537:-
CircRNA type . Gene ID ENSG00000115414.14
Gene Name FN1 Detection pipeline .
Sample Type Huvec; Hsmm; Hepg2
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases HSA_CIRCpedia_93490 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr2:216246934-216256537
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type Hs68
Method for Estimation RNaseR
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases hsa_circ_0058107 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr2:216246934-216256537:-
CircRNA type N/A Gene ID ENSG00000115414.14
Gene Name FN1 Detection pipeline N/A
Sample Type Hypopharyngeal Squamous Cell Carcinoma
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer CTGCAGGTCCAGATCAAACA
Reverse Primer CATGGTGTCTGGACCAATGT
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
143 GTCCTCAAGTGGCGTCTAGA ACTTCCTGGTGCGTTACTCA 55 50 58.825 58.955 164 306 20 20
224 AAAGTCCTCAAGTGGCGTCT CTGACCTGCGATTCACCAAC 50 55 59.241 59.201 161 384 20 20
211 AGTGGCGTCTAGAGTTTGGT ACCTGCGATTCACCAACATT 50 45 58.661 58.09 171 381 20 20
109 ATGCAACATCCACGTCATCC CCTTCAGACAATGCAGTGGT 50 50 58.617 58.098 136 244 20 20
276 TGCAAAGGGAGTGAAAAGCA CTCCCACTGACCTGCGATT 45 57.895 58.226 59.401 115 390 20 19
248 CAACATCCACGTCATCCACT CACTGACCTGCGATTCACC 50 57.895 57.901 58.54 139 386 20 19
224 TGGCGTCTAGAGTTTGGTAGT TTCCTCCTCCCACTGACCTG 47.619 60 58.478 60.545 173 396 21 20
109 CAAATGCAACATCCACGTCA TCAGACAATGCAGTGGTCTT 45 45 57.297 57.063 133 241 20 20
160 GCAAAGGGAGTGAAAAGCAAAT TGAGGAAGATGTTGCAGAGTTG 40.909 45.455 58.268 58.594 116 275 22 22
106 CTCAAGTGGCGTCTAGAGTTT GGAAGATGTTGCAGAGTTGTCA 47.619 45.455 57.695 58.859 167 272 21 22
143 GTCCTCAAGTGGCGTCTAGA ACTTCCTGGTGCGTTACTCA 55 50 58.825 58.955 164 306 20 20
211 AGTGGCGTCTAGAGTTTGGT ACCTGCGATTCACCAACATT 50 45 58.661 58.09 171 381 20 20
224 AAAGTCCTCAAGTGGCGTCT CTGACCTGCGATTCACCAAC 50 55 59.241 59.201 161 384 20 20
109 ATGCAACATCCACGTCATCC CCTTCAGACAATGCAGTGGT 50 50 58.617 58.098 136 244 20 20
276 TGCAAAGGGAGTGAAAAGCA CTCCCACTGACCTGCGATT 45 57.895 58.226 59.401 115 390 20 19
224 TGGCGTCTAGAGTTTGGTAGT TTCCTCCTCCCACTGACCTG 47.619 60 58.478 60.545 173 396 21 20
248 CAACATCCACGTCATCCACT CACTGACCTGCGATTCACC 50 57.895 57.901 58.54 139 386 20 19
109 CAAATGCAACATCCACGTCA TCAGACAATGCAGTGGTCTT 45 45 57.297 57.063 133 241 20 20
106 CTCAAGTGGCGTCTAGAGTTT GGAAGATGTTGCAGAGTTGTCA 47.619 45.455 57.695 58.859 167 272 21 22
160 GCAAAGGGAGTGAAAAGCAAAT TGAGGAAGATGTTGCAGAGTTG 40.909 45.455 58.268 58.594 116 275 22 22