Aliases hsa_circ_0004872 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr22:22153300-22162135:-
CircRNA type . Gene ID ENSG00000100030.10
Gene Name MAPK1 Detection pipeline .
Sample Type Hs68_RNase; Hs68_control; Nhek; K562; Huvec; Hepg2; Helas3; H1hesc; Gm12878; Bj; Ag04450; A549; Sknshra; Mcf7
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25234927
Aliases HSA_CIRCpedia_36056 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr22:22153300-22162135
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type AG04450;Stomach;Liver_T13;SH-SY5Y_D0_exp2;K562;Liver_T6;HUVEC;Liver_N14;Cortex;Occipital;Thyroid;PA1;A549;Diencephalon;Liver_T10;Liver_T8;HepG2;Liver;Liver_N12;Liver_T14;Temporal;Liver_N11;Liver_N7;Lung;Liver_T11;Cerebellum;H9;Liver_N13;Liver_N6;Forebrain;GM12878;Heart;Liver_T12;Liver_N3;Liver_N10;HeLa_S3;Liver_T3;H1;NHEK;Kidney;BJ;Parietal;Hs68;Liver_N21;Liver_T17;Liver_T22;Liver_T20;Liver_T21;Liver_N17;Liver_N19;Liver_T18;Liver_T19;Liver_N22;Liver_N20
Method for Estimation poly(A)-;Ribo-;RNaseR
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 30172046
Aliases hsa_circ_0004872 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr22:22153300-22162135:-
CircRNA type N/A Gene ID ENSG00000100030.10
Gene Name MAPK1 Detection pipeline N/A
Sample Type Gliomas
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer TGCAGATCCAGACCATGATCACA
Reverse Primer TTCTCATGTCTGAAGCGCAGT
Pubmed 28236760
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
222 TTCTGGAGCCCTGTACCAAC TTAAGAGGGCCAGCAACTGT 55 50 59.309 59.229 18 239 20 20
148 CCAGGCCAAAGTCACAGATC CCAAAATTAAGAGGGCCAGCA 55 47.619 58.543 58.821 98 245 20 21
159 GGAACCCTGTGTGATCATGG CACCGAGGAAAAGCACTCC 55 57.895 58.245 58.455 59 217 20 19
175 CATGGTCTGGATCTGCAACA ACACCAAAATTAAGAGGGCCA 50 42.857 57.882 57.747 74 248 20 21
159 TGATCATGGTCTGGATCTGCA AGCAACTGTCCCACCGAG 47.619 61.111 58.879 59.256 70 228 21 18
199 CCTGTGTGATCATGGTCTGG ACTTGGAAGCACATACACCA 55 45 57.966 57.051 64 262 20 20
154 GTCTGGATCTGCAACACGG GCCAGCAACTGTCCCACC 57.895 66.667 58.54 60.986 78 231 19 18
164 GCCAGGCCAAAGTCACAG TTGGAAGCACATACACCAAAATT 61.111 34.783 58.641 57.456 97 260 18 23
180 CAGGCCAAAGTCACAGATCTAA GACTGGAGGTTTAGATACTTGGA 45.455 43.478 58.057 57.066 99 278 22 23
209 TGTGTGATCATGGTCTGGATCT GGAGGTTTAGATACTTGGAAGCA 45.455 43.478 58.89 57.901 66 274 22 23
226 CAACATAATTTCTGGAGCCCTGT AGGGCCAGCAACTGTCCC 43.478 66.667 58.981 61.972 9 234 23 18
258 CCAGGCCAAAGTCACAGATC AAATCAGCCCCTTTGAGCAC 55 50 58.543 58.739 98 355 20 20
187 GGAACCCTGTGTGATCATGG GCACCAACCATCGAGCAAAT 55 50 58.245 59.472 59 245 20 20
330 TTCTGGAGCCCTGTACCAAC CCCTTTGAGCACCAGACCTA 55 55 59.309 59.016 18 347 20 20
188 CCTGTGTGATCATGGTCTGG ATTCGAGCACCAACCATCGA 55 50 57.966 59.751 64 251 20 20
188 TGATCATGGTCTGGATCTGCA GACATTATTCGAGCACCAACCA 47.619 45.455 58.879 58.993 70 257 21 22
170 CATGGTCTGGATCTGCAACA ACCAACCATCGAGCAAATGAA 50 42.857 57.882 58.486 74 243 20 21
169 GTCTGGATCTGCAACACGG AGCACCAACCATCGAGCA 57.895 55.556 58.54 59.25 78 246 19 18
343 GAGCCCTGTACCAACGTGT GCTATCAAGAAAATCAGCCCCT 57.895 45.455 59.63 58.44 23 365 19 22
296 TGTGTGATCATGGTCTGGATCT TCAAGAAAATCAGCCCCTTTGA 45.455 40.909 58.89 58.157 66 361 22 22
143 GCCAGGCCAAAGTCACAG ACCATCGAGCAAATGAAAGATGT 61.111 39.13 58.641 58.988 97 239 18 23
143 CAGGCCAAAGTCACAGATCTAA CAACCATCGAGCAAATGAAAGA 45.455 40.909 58.057 57.576 99 241 22 22
162 GGCCAAAGTCACAGATCTAAGAG TCAATGACATTATTCGAGCACCA 47.826 39.13 58.812 58.488 101 262 23 23