Aliases hsa_circ_0003391 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr11:122646926-122647918:+
CircRNA type . Gene ID ENSG00000154127.5
Gene Name UBASH3B Detection pipeline .
Sample Type Hs68_RNase; Hs68_control
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25234927
Aliases HSA_CIRCpedia_3560 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr11:122646926-122647918
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type Parietal;Diencephalon;Liver_N13;AG04450;PA1;Forebrain;Liver_N7;GM12878;HepG2;Cortex;Lung;H9;Liver_N11;SH-SY5Y_D0_exp2;Liver_N3;NHEK;BJ;Liver_T14;HUVEC;Liver_T8;A549;Liver_T7;Temporal;Heart;Cerebellum;Liver_N15;HeLa_S3;Occipital;Hs68;Liver_N17;Liver_T21;Liver_N20;Liver_T19;Liver_T18;Liver_N21;Liver_N19
Method for Estimation Ribo-;poly(A)-;RNaseR
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 30172046
Aliases hsa_circ_0003391 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr11:122646926-122647918:+
CircRNA type N/A Gene ID ENSG00000154127.5
Gene Name UBASH3B Detection pipeline N/A
Sample Type Postmenopausal Osteoporosis
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer CACAACATCTTCCCCCACAT
Reverse Primer GATGCCAAGGCTTTTTGTCA
Pubmed 29742503
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
131 ACTTTTGGCAGCAGTCGAAG GCTGCCTGAACACTTCTTCC 50 55 59.053 59.122 114 244 20 20
145 AGCTTTCCGACTTTTGGCAG CACATGCTGCCTGAACACTT 50 50 59.046 59.043 105 249 20 20
141 GCACAGAAGCTTTCCGACTT TGAACACTTCTTCCTCCCGT 50 50 58.77 58.58 98 238 20 20
134 TTTCCGACTTTTGGCAGCAG GCCTGAACACTTCTTCCTCC 50 55 59.332 58.185 108 241 20 20
132 CAGCAGTCGAAGCAGATCTG CAGTCACATGCTGCCTGAAC 55 55 58.721 59.48 122 253 20 20
185 GATCTGCGGGAAGAACAAGG CCACTCATCCACATGCACTT 55 50 58.626 58.17 136 320 20 20
196 GGGAAGAACAAGGCACACAA GAGAAAGTCTGCACCTCCCC 50 60 58.601 60.036 143 338 20 20
109 AAGGCACACAACATCTTCCC TACCAACCAGTCACATGCTG 50 50 58.379 57.817 152 260 20 20
160 CCCACATCACACTCTGCCA CTGCACCTCCCCACTCATC 57.895 63.158 59.624 59.777 171 330 19 19
145 AGCTTTCCGACTTTTGGCAG CACATGCTGCCTGAACACTT 50 50 59.046 59.043 105 249 20 20
131 ACTTTTGGCAGCAGTCGAAG GCTGCCTGAACACTTCTTCC 50 55 59.053 59.122 114 244 20 20
141 GCACAGAAGCTTTCCGACTT TGAACACTTCTTCCTCCCGT 50 50 58.77 58.58 98 238 20 20
132 CAGCAGTCGAAGCAGATCTG CAGTCACATGCTGCCTGAAC 55 55 58.721 59.48 122 253 20 20
134 TTTCCGACTTTTGGCAGCAG GCCTGAACACTTCTTCCTCC 50 55 59.332 58.185 108 241 20 20
185 GATCTGCGGGAAGAACAAGG CCACTCATCCACATGCACTT 55 50 58.626 58.17 136 320 20 20
109 AAGGCACACAACATCTTCCC TACCAACCAGTCACATGCTG 50 50 58.379 57.817 152 260 20 20
196 GGGAAGAACAAGGCACACAA GAGAAAGTCTGCACCTCCCC 50 60 58.601 60.036 143 338 20 20
160 CCCACATCACACTCTGCCA CTGCACCTCCCCACTCATC 57.895 63.158 59.624 59.777 171 330 19 19
131 ACTTTTGGCAGCAGTCGAAG GCTGCCTGAACACTTCTTCC 50 55 59.053 59.122 114 244 20 20
145 AGCTTTCCGACTTTTGGCAG CACATGCTGCCTGAACACTT 50 50 59.046 59.043 105 249 20 20
141 GCACAGAAGCTTTCCGACTT TGAACACTTCTTCCTCCCGT 50 50 58.77 58.58 98 238 20 20
134 TTTCCGACTTTTGGCAGCAG GCCTGAACACTTCTTCCTCC 50 55 59.332 58.185 108 241 20 20
132 CAGCAGTCGAAGCAGATCTG CAGTCACATGCTGCCTGAAC 55 55 58.721 59.48 122 253 20 20
185 GATCTGCGGGAAGAACAAGG CCACTCATCCACATGCACTT 55 50 58.626 58.17 136 320 20 20
196 GGGAAGAACAAGGCACACAA GAGAAAGTCTGCACCTCCCC 50 60 58.601 60.036 143 338 20 20
109 AAGGCACACAACATCTTCCC TACCAACCAGTCACATGCTG 50 50 58.379 57.817 152 260 20 20
160 CCCACATCACACTCTGCCA CTGCACCTCCCCACTCATC 57.895 63.158 59.624 59.777 171 330 19 19