| Aliases | hsa_circ_0006801 | Scientific name | Homo sapiens (hg19) | ||||
| Organism | Human | Genome Locus | chr3:149613259-149639014:+ | ||||
| CircRNA type | . | Gene ID | ENSG00000018408.14 | ||||
| Gene Name | WWTR1 | Detection pipeline | . | ||||
| Sample Type | Hs68_RNase; Hs68_control; Nhek; K562; Hepg2; Helas3; Gm12878; Sknshra | ||||||||
| Method for Estimation | RNA-Seq with Rnase R resistance | ||||||||
| Circular RNA status | Experimented | PCR Details | Link to the detailed experimental procedure | ||||||
| Primers (Experimented) | |||||||||
| Primers (Validated) | |||||||||
| Forward Primer | . | ||||||||
| Reverse Primer | . | ||||||||
| Aliases | HSA_CIRCpedia_43998 | Scientific name | Homo sapiens (hg19) | ||||
| Organism | Human | Genome Locus | chr3:149613259-149639014 | ||||
| CircRNA type | . | Gene ID | NA | ||||
| Gene Name | NA | Detection pipeline | . | ||||
| Sample Type | Thyroid;Liver_T8;Liver_T11;Liver_N7;Liver_T15;Liver_N13;Occipital;NHEK;Temporal;Liver_N11;Liver_N10;H9;Lung;Liver_T12;Stomach;HepG2;Parietal;Diencephalon;Liver_T6;Liver_N12;A549;GM12878;Liver_N14;Liver_T7;HeLa_S3;SH-SY5Y_D8_exp2;Cerebellum;Heart;Liver;Liver_T14;Liver_N6;Liver_N8;Liver_N15;Cortex;Liver_N3;Liver_T13;Liver_T3;Hs68;Liver_N18;Liver_N21;Liver_T18;Liver_T21;Liver_N17;Liver_T22;Liver_N19;Liver_T20;Liver_T17;Liver_N22;Liver_N20;Liver_T19 | ||||||||
| Method for Estimation | Ribo-;poly(A)-;RNaseR | ||||||||
| Circular RNA status | Experimented | PCR Details | Link to the detailed experimental procedure | ||||||
| Primers (Experimented) | |||||||||
| Primers (Validated) | |||||||||
| Forward Primer | . | ||||||||
| Reverse Primer | . | ||||||||
| Aliases | hsa_circRNA_103493 | Scientific name | Homo sapiens (hg19) | ||||
| Organism | Human | Genome Locus | chr3:149613259-149639014:+ | ||||
| CircRNA type | exonic | Gene ID | ENSG00000018408.14 | ||||
| Gene Name | WWTR1 | Detection pipeline | n/a | ||||
| Sample Type | Esophageal cancer | ||||||||
| Method for Estimation | . | ||||||||
| Circular RNA status | Experimented | PCR Details | Link to the detailed experimental procedure | ||||||
| Primers (Experimented) | |||||||||
| Primers (Validated) | |||||||||
| Forward Primer | . | ||||||||
| Reverse Primer | . | ||||||||
| Aliases | hsa_circ_0006801 | Scientific name | Homo sapiens (hg19) | ||||
| Organism | Human | Genome Locus | chr3:149613259-149639014:+ | ||||
| CircRNA type | N/A | Gene ID | ENSG00000018408.14 | ||||
| Gene Name | WWTR1 | Detection pipeline | N/A | ||||
| Sample Type | Postmenopausal Osteoporosis | ||||||||
| Method for Estimation | Microarray and Quantitative PCR | ||||||||
| Circular RNA status | Validated | PCR Details | Link to the detailed experimental procedure | ||||||
| Primers (Experimented) | |||||||||
| Primers (Validated) | |||||||||
| Forward Primer | TTCAAGAAAGGTTTTAAATG | ||||||||
| Reverse Primer | ACATTGTGAACTATGGCTGC | ||||||||
| Suggested primers | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Product size | Left primer | Right primer | Left GC | Right GC | Left TM | Right TM | Left pos | Right pos | Left size | Right size | |
| 182 | TGGTCACTTTCTCTTTGCACA | TGTATCCTGCTCTCTGTGCA | 42.857 | 50 | 58.002 | 58.439 | 46 | 227 | 21 | 20 | |
| 188 | GGTCACTTTCTCTTTGCACATTT | GCTGCCTTGTATCCTGCTCT | 39.13 | 55 | 58.063 | 59.82 | 47 | 234 | 23 | 20 | |
| 188 | GGTCACTTTCTCTTTGCACATTT | GCTGCCTTGTATCCTGCTCT | 39.13 | 55 | 58.063 | 59.82 | 47 | 234 | 23 | 20 | |
| 182 | TGGTCACTTTCTCTTTGCACA | TGTATCCTGCTCTCTGTGCA | 42.857 | 50 | 58.002 | 58.439 | 46 | 227 | 21 | 20 | |
| 182 | TGGTCACTTTCTCTTTGCACA | TGTATCCTGCTCTCTGTGCA | 42.857 | 50 | 58.002 | 58.439 | 46 | 227 | 21 | 20 | |
| 188 | GGTCACTTTCTCTTTGCACATTT | GCTGCCTTGTATCCTGCTCT | 39.13 | 55 | 58.063 | 59.82 | 47 | 234 | 23 | 20 | |
| 182 | TGGTCACTTTCTCTTTGCACA | TGTATCCTGCTCTCTGTGCA | 42.857 | 50 | 58.002 | 58.439 | 46 | 227 | 21 | 20 | |
| 188 | GGTCACTTTCTCTTTGCACATTT | GCTGCCTTGTATCCTGCTCT | 39.13 | 55 | 58.063 | 59.82 | 47 | 234 | 23 | 20 | |