Aliases hsa_circ_0068669 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr3:196612021-196613565:+
CircRNA type . Gene ID ENSG00000119231.6
Gene Name SENP5 Detection pipeline .
Sample Type Nhek; K562; Huvec; Helas3; H1hesc; Gm12878; Bj; Ag04450; A549; Sknshra
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25234927
Aliases HSA_CIRCpedia_45060 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr3:196612021-196613565
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type Liver_T14;Liver;Liver_N15;GM12878;A549;Forebrain;Liver_T3;HeLa_S3;Cortex;K562;AG04450;Stomach;SH-SY5Y_D2_exp1;Liver_N14;Heart;Diencephalon;Liver_T10;H9;Liver_T12;Liver_N13;BJ;Liver_N7;NHEK;Liver_N12;Lung;PA1;Liver_T11;H1;Occipital;Hs68;Liver_T17;Liver_T20;Liver_T19;Liver_T18;Liver_N17;Liver_N21;Liver_N18;Liver_N19;Liver_N20;Liver_T22;Liver_N22
Method for Estimation Ribo-;poly(A)-;RNaseR
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 30172046
Aliases hsa_circRNA_103561 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr3:196612021-196613565:+
CircRNA type exonic Gene ID ENSG00000119231.6
Gene Name SENP5 Detection pipeline n/a
Sample Type Esophageal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 27465405
Aliases hsa_circ_0068669 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr3:196612021-196613565:+
CircRNA type N/A Gene ID ENSG00000119231.6
Gene Name SENP5 Detection pipeline N/A
Sample Type Liver cell carcinoma
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer ACAGTCAGAAAGCCTCTCCAG
Reverse Primer GCCTCCAAACCCAGTATTCCAT
Pubmed 29785842
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
225 GCCTCTCCAGTGGATGATGA TCCAAGTAACTGGCCTTCCC 55 55 58.874 59.303 157 381 20 20
213 GGTGTGCAGTGGACTCAAAC GCCTCCAAACCCAGTATTCC 55 55 59.337 58.236 99 311 20 20
170 AGTTCTGAGTTGCTGGACCA TGAGATCTGGATGCAGCAGA 50 50 58.868 58.507 46 215 20 20
164 AAAGCCTCTCCAGTGGATGA CTTAAAGCCTCCAAACCCAGT 50 47.619 58.339 58.123 154 317 20 21
112 TTGGTGTGCAGTGGACTCA TGGATGCAGCAGAAAGACAG 52.632 50 59.089 58.183 97 208 19 20
167 CTGTCTTTCTGCTGCATCCA GCTTTCAGAATGCACAAGTGT 50 42.857 58.183 57.64 189 355 20 21
126 CAGTCTGTCTTTCTGCTGCA CCTCCAAACCCAGTATTCCATT 50 45.455 58.125 58.019 185 310 20 22
119 CCCTTGGTGTGCAGTGGA GATCTGGATGCAGCAGAAAGA 61.111 47.619 59.485 58.085 94 212 18 21
106 TGTGCAGTGGACTCAAACTAG GATGCAGCAGAAAGACAGACT 47.619 47.619 57.888 58.302 101 206 21 21
209 GCTGTCAGTCTGTCTTTCTGC TGTCTATTCCAAGTAACTGGCCT 52.381 43.478 59.202 59.156 180 388 21 23
126 CTCCAGTGGATGATGAACAGC TCAGAAAAGGCTAAGTGGATTCC 52.381 43.478 58.713 58.41 161 286 21 23
158 AGGAGGTGGAAAGAACAGTCA TTCTCAGAAAAGGCTAAGTGGA 47.619 40.909 58.591 57.025 132 289 21 22
138 TGATGAACAGCTGTCAGTCTG TCCAAACCCAGTATTCCATTTCT 47.619 39.13 57.964 57.73 171 308 21 23
225 GCCTCTCCAGTGGATGATGA TCCAAGTAACTGGCCTTCCC 55 55 58.874 59.303 157 381 20 20
170 AGTTCTGAGTTGCTGGACCA TGAGATCTGGATGCAGCAGA 50 50 58.868 58.507 46 215 20 20
112 TTGGTGTGCAGTGGACTCA TGGATGCAGCAGAAAGACAG 52.632 50 59.089 58.183 97 208 19 20
213 GGTGTGCAGTGGACTCAAAC GCCTCCAAACCCAGTATTCC 55 55 59.337 58.236 99 311 20 20
164 AAAGCCTCTCCAGTGGATGA CTTAAAGCCTCCAAACCCAGT 50 47.619 58.339 58.123 154 317 20 21
167 CTGTCTTTCTGCTGCATCCA GCTTTCAGAATGCACAAGTGT 50 42.857 58.183 57.64 189 355 20 21
209 GCTGTCAGTCTGTCTTTCTGC TGTCTATTCCAAGTAACTGGCCT 52.381 43.478 59.202 59.156 180 388 21 23
126 CTCCAGTGGATGATGAACAGC TCAGAAAAGGCTAAGTGGATTCC 52.381 43.478 58.713 58.41 161 286 21 23
119 CCCTTGGTGTGCAGTGGA GATCTGGATGCAGCAGAAAGA 61.111 47.619 59.485 58.085 94 212 18 21
106 TGTGCAGTGGACTCAAACTAG GATGCAGCAGAAAGACAGACT 47.619 47.619 57.888 58.302 101 206 21 21
158 AGGAGGTGGAAAGAACAGTCA TTCTCAGAAAAGGCTAAGTGGA 47.619 40.909 58.591 57.025 132 289 21 22
126 CAGTCTGTCTTTCTGCTGCA CCTCCAAACCCAGTATTCCATT 50 45.455 58.125 58.019 185 310 20 22
138 TGATGAACAGCTGTCAGTCTG TCCAAACCCAGTATTCCATTTCT 47.619 39.13 57.964 57.73 171 308 21 23
213 GGTGTGCAGTGGACTCAAAC GCCTCCAAACCCAGTATTCC 55 55 59.337 58.236 99 311 20 20
225 GCCTCTCCAGTGGATGATGA TCCAAGTAACTGGCCTTCCC 55 55 58.874 59.303 157 381 20 20
170 AGTTCTGAGTTGCTGGACCA TGAGATCTGGATGCAGCAGA 50 50 58.868 58.507 46 215 20 20
167 CTGTCTTTCTGCTGCATCCA GCTTTCAGAATGCACAAGTGT 50 42.857 58.183 57.64 189 355 20 21
112 TTGGTGTGCAGTGGACTCA TGGATGCAGCAGAAAGACAG 52.632 50 59.089 58.183 97 208 19 20
164 AAAGCCTCTCCAGTGGATGA CTTAAAGCCTCCAAACCCAGT 50 47.619 58.339 58.123 154 317 20 21
106 TGTGCAGTGGACTCAAACTAG GATGCAGCAGAAAGACAGACT 47.619 47.619 57.888 58.302 101 206 21 21
126 CAGTCTGTCTTTCTGCTGCA CCTCCAAACCCAGTATTCCATT 50 45.455 58.125 58.019 185 310 20 22
209 GCTGTCAGTCTGTCTTTCTGC TGTCTATTCCAAGTAACTGGCCT 52.381 43.478 59.202 59.156 180 388 21 23
119 CCCTTGGTGTGCAGTGGA GATCTGGATGCAGCAGAAAGA 61.111 47.619 59.485 58.085 94 212 18 21
126 CTCCAGTGGATGATGAACAGC TCAGAAAAGGCTAAGTGGATTCC 52.381 43.478 58.713 58.41 161 286 21 23
158 AGGAGGTGGAAAGAACAGTCA TTCTCAGAAAAGGCTAAGTGGA 47.619 40.909 58.591 57.025 132 289 21 22
138 TGATGAACAGCTGTCAGTCTG TCCAAACCCAGTATTCCATTTCT 47.619 39.13 57.964 57.73 171 308 21 23
225 GCCTCTCCAGTGGATGATGA TCCAAGTAACTGGCCTTCCC 55 55 58.874 59.303 157 381 20 20
170 AGTTCTGAGTTGCTGGACCA TGAGATCTGGATGCAGCAGA 50 50 58.868 58.507 46 215 20 20
213 GGTGTGCAGTGGACTCAAAC GCCTCCAAACCCAGTATTCC 55 55 59.337 58.236 99 311 20 20
112 TTGGTGTGCAGTGGACTCA TGGATGCAGCAGAAAGACAG 52.632 50 59.089 58.183 97 208 19 20
164 AAAGCCTCTCCAGTGGATGA CTTAAAGCCTCCAAACCCAGT 50 47.619 58.339 58.123 154 317 20 21
167 CTGTCTTTCTGCTGCATCCA GCTTTCAGAATGCACAAGTGT 50 42.857 58.183 57.64 189 355 20 21
126 CAGTCTGTCTTTCTGCTGCA CCTCCAAACCCAGTATTCCATT 50 45.455 58.125 58.019 185 310 20 22
106 TGTGCAGTGGACTCAAACTAG GATGCAGCAGAAAGACAGACT 47.619 47.619 57.888 58.302 101 206 21 21
209 GCTGTCAGTCTGTCTTTCTGC TGTCTATTCCAAGTAACTGGCCT 52.381 43.478 59.202 59.156 180 388 21 23
119 CCCTTGGTGTGCAGTGGA GATCTGGATGCAGCAGAAAGA 61.111 47.619 59.485 58.085 94 212 18 21
126 CTCCAGTGGATGATGAACAGC TCAGAAAAGGCTAAGTGGATTCC 52.381 43.478 58.713 58.41 161 286 21 23
158 AGGAGGTGGAAAGAACAGTCA TTCTCAGAAAAGGCTAAGTGGA 47.619 40.909 58.591 57.025 132 289 21 22
138 TGATGAACAGCTGTCAGTCTG TCCAAACCCAGTATTCCATTTCT 47.619 39.13 57.964 57.73 171 308 21 23