Aliases hsa_circ_0008887 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr11:33307958-33350179:+
CircRNA type . Gene ID ENSG00000110422.7
Gene Name HIPK3 Detection pipeline .
Sample Type Hs68_RNase; Hs68_control; K562; Huvec; Hepg2; Helas3; Gm12878; Bj; Ag04450; A549; Nhek; Sknshra; Mcf7
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases HSA_CIRCpedia_4135 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr11:33307958-33350179
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type Liver_T11;Occipital;Liver_N10;HepG2;A549;Liver;Parietal;Liver_N7;Liver_T14;Cerebellum;Diencephalon;Stomach;AG04450;Liver_N14;Cortex;Liver_T12;Liver_T7;Thyroid;BJ;Liver_N3;Liver_N12;HUVEC;Lung;HeLa_S3;K562;Liver_N11;Liver_T10;Temporal;Liver_T8;Hs68;Liver_N22;Liver_N17;Liver_N20;Liver_T20
Method for Estimation Ribo-;poly(A)-;RNaseR
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases hsa_circRNA_100783 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr11:33307958-33350179:+
CircRNA type exonic Gene ID ENSG00000110422.7
Gene Name HIPK3 Detection pipeline n/a
Sample Type Esophageal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases circular RNA100783/hsa_circ_0008887 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr11:33307958-33350179:+
CircRNA type N/A Gene ID ENSG00000110422.7
Gene Name HIPK3 Detection pipeline N/A
Sample Type Immunosenescence
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer CCATTTTGTGAAGCCATAGAC
Reverse Primer CACATAGGTCCGTGGATAGTTT
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
130 TACCCAGGAGCCTTGGAGTA ACACAACTGCTTGGCTCTAC 55 50 59.286 58.116 173 302 20 20
214 TGGGATGTGTGATTGCAGAA TCTACCATTCACATAGGTCCGT 45 45.455 57.417 58.361 132 345 20 22
127 TGCCATTTTGTGAAGCCATAGA GTAGACCAAGACTTGTGAGGC 40.909 52.381 58.571 58.31 99 225 22 21
130 TCTACCCAGGAGCCTTGGA ACAACTGCTTGGCTCTACTTTG 57.895 45.455 59.212 59.119 171 300 19 22
133 CCAGGAGCCTTGGAGTATGA TGGAATACACAACTGCTTGGC 55 47.619 58.5 59.114 176 308 20 21
129 TGGGGTTGCCATTTTGTGAA ACCAAGACTTGTGAGGCCAT 45 50 58.5 59.226 93 221 20 20
131 AGCCTTGGAGTATGATCAGGT TCCTGGAATACACAACTGCTT 47.619 42.857 58.231 57.212 181 311 21 21
152 CTTGGAGTATGATCAGGTATGGC ACATAGGTCCGTGGATAGTTTCT 47.826 43.478 58.426 58.712 184 335 23 23
144 TGGGATGTGTGATTGCAGAATTA TTCTTCACACTACAAAAGGCAC 39.13 40.909 58.402 57.107 132 275 23 22
154 AGGAGCCTTGGAGTATGATCA AGGTCCGTGGATAGTTTCTTTC 47.619 45.455 57.948 57.796 178 331 21 22
103 TTTTGTGAAGCCATAGACATGTG GCCATACCTGATCATACTCCAAG 39.13 47.826 57.625 58.426 104 206 23 23
133 CCAGGAGCCTTGGAGTATGA TGGAATACACAACTGCTTGGC 55 47.619 58.5 59.114 176 308 20 21
129 TGGGGTTGCCATTTTGTGAA ACCAAGACTTGTGAGGCCAT 45 50 58.5 59.226 93 221 20 20
130 TACCCAGGAGCCTTGGAGTA ACACAACTGCTTGGCTCTAC 55 50 59.286 58.116 173 302 20 20
127 TGCCATTTTGTGAAGCCATAGA GTAGACCAAGACTTGTGAGGC 40.909 52.381 58.571 58.31 99 225 22 21
131 AGCCTTGGAGTATGATCAGGT TCCTGGAATACACAACTGCTT 47.619 42.857 58.231 57.212 181 311 21 21
154 AGGAGCCTTGGAGTATGATCA AGGTCCGTGGATAGTTTCTTTC 47.619 45.455 57.948 57.796 178 331 21 22
130 TCTACCCAGGAGCCTTGGA ACAACTGCTTGGCTCTACTTTG 57.895 45.455 59.212 59.119 171 300 19 22
214 TGGGATGTGTGATTGCAGAA TCTACCATTCACATAGGTCCGT 45 45.455 57.417 58.361 132 345 20 22
152 CTTGGAGTATGATCAGGTATGGC ACATAGGTCCGTGGATAGTTTCT 47.826 43.478 58.426 58.712 184 335 23 23
144 TGGGATGTGTGATTGCAGAATTA TTCTTCACACTACAAAAGGCAC 39.13 40.909 58.402 57.107 132 275 23 22
103 TTTTGTGAAGCCATAGACATGTG GCCATACCTGATCATACTCCAAG 39.13 47.826 57.625 58.426 104 206 23 23
130 TACCCAGGAGCCTTGGAGTA ACACAACTGCTTGGCTCTAC 55 50 59.286 58.116 173 302 20 20
130 TCTACCCAGGAGCCTTGGA ACAACTGCTTGGCTCTACTTTG 57.895 45.455 59.212 59.119 171 300 19 22
133 CCAGGAGCCTTGGAGTATGA TGGAATACACAACTGCTTGGC 55 47.619 58.5 59.114 176 308 20 21
129 TGGGGTTGCCATTTTGTGAA ACCAAGACTTGTGAGGCCAT 45 50 58.5 59.226 93 221 20 20
127 TGCCATTTTGTGAAGCCATAGA GTAGACCAAGACTTGTGAGGC 40.909 52.381 58.571 58.31 99 225 22 21
214 TGGGATGTGTGATTGCAGAA TCTACCATTCACATAGGTCCGT 45 45.455 57.417 58.361 132 345 20 22
131 AGCCTTGGAGTATGATCAGGT TCCTGGAATACACAACTGCTT 47.619 42.857 58.231 57.212 181 311 21 21
152 CTTGGAGTATGATCAGGTATGGC ACATAGGTCCGTGGATAGTTTCT 47.826 43.478 58.426 58.712 184 335 23 23
144 TGGGATGTGTGATTGCAGAATTA TTCTTCACACTACAAAAGGCAC 39.13 40.909 58.402 57.107 132 275 23 22
154 AGGAGCCTTGGAGTATGATCA AGGTCCGTGGATAGTTTCTTTC 47.619 45.455 57.948 57.796 178 331 21 22
103 TTTTGTGAAGCCATAGACATGTG GCCATACCTGATCATACTCCAAG 39.13 47.826 57.625 58.426 104 206 23 23
129 TGGGGTTGCCATTTTGTGAA ACCAAGACTTGTGAGGCCAT 45 50 58.5 59.226 93 221 20 20
130 TACCCAGGAGCCTTGGAGTA ACACAACTGCTTGGCTCTAC 55 50 59.286 58.116 173 302 20 20
130 TCTACCCAGGAGCCTTGGA ACAACTGCTTGGCTCTACTTTG 57.895 45.455 59.212 59.119 171 300 19 22
133 CCAGGAGCCTTGGAGTATGA TGGAATACACAACTGCTTGGC 55 47.619 58.5 59.114 176 308 20 21
127 TGCCATTTTGTGAAGCCATAGA GTAGACCAAGACTTGTGAGGC 40.909 52.381 58.571 58.31 99 225 22 21
214 TGGGATGTGTGATTGCAGAA TCTACCATTCACATAGGTCCGT 45 45.455 57.417 58.361 132 345 20 22
131 AGCCTTGGAGTATGATCAGGT TCCTGGAATACACAACTGCTT 47.619 42.857 58.231 57.212 181 311 21 21
154 AGGAGCCTTGGAGTATGATCA AGGTCCGTGGATAGTTTCTTTC 47.619 45.455 57.948 57.796 178 331 21 22
152 CTTGGAGTATGATCAGGTATGGC ACATAGGTCCGTGGATAGTTTCT 47.826 43.478 58.426 58.712 184 335 23 23
144 TGGGATGTGTGATTGCAGAATTA TTCTTCACACTACAAAAGGCAC 39.13 40.909 58.402 57.107 132 275 23 22
103 TTTTGTGAAGCCATAGACATGTG GCCATACCTGATCATACTCCAAG 39.13 47.826 57.625 58.426 104 206 23 23