Aliases hsa_circ_0005105 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr5:134022479-134023989:+
CircRNA type . Gene ID ENSG00000113615.8
Gene Name SEC24A Detection pipeline .
Sample Type Hs68_RNase; Hs68_control; K562; Hepg2; Helas3; H1hesc; Gm12878; Bj; Ag04450; A549; Nhek
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25234927
Aliases HSA_CIRCpedia_50238 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr5:134022479-134023989
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type Kidney;Temporal;BJ;Heart;Thyroid;Occipital;HeLa_S3;Cortex;A549;Liver_T7;Stomach;Liver_T12;H1;HUVEC;Liver;Liver_T14;Liver_T15;H9;Cerebellum;K562;Diencephalon;NHEK;HepG2;Liver_N6;Liver_T8;Liver_N12;AG04450;Parietal;GM12878;PA1;Hs68;Liver_T17;Liver_N18;Liver_T19;Liver_N20;Liver_T21
Method for Estimation Ribo-;poly(A)-;RNaseR
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 30172046
Aliases circ_002478 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr5:134022479-134023989:+
CircRNA type n/a Gene ID ENSG00000113615.8
Gene Name SEC24A Detection pipeline Find_circ
Sample Type colorectal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25624062
Aliases hsa_circRNA_103944 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr5:134022479-134023989:+
CircRNA type exonic Gene ID ENSG00000113615.8
Gene Name SEC24A Detection pipeline n/a
Sample Type Esophageal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 27465405
Aliases hsa_circ_0005105 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr5:134022479-134023989:+
CircRNA type N/A Gene ID ENSG00000113615.8
Gene Name SEC24A Detection pipeline N/A
Sample Type Osteoarthritis
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer AGATATTGAAGTTACGACCACCTC
Reverse Primer GGAAGCAAATCCAGATTGTCTAAC
Pubmed 28276108
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
101 TCCATTTCTACGGTCTTCAGGA ACAAAGAGATACACTGGAGGCT 45.455 45.455 58.563 58.823 134 234 22 22
104 TCTCTCTCAACCTCAGATGCT TTCGACTGCATTGTGAGACA 47.619 45 57.901 57.475 159 262 21 20
102 ACAGTACAATCCATTTCTACGGT ATACACTGGAGGCTGAGGTG 39.13 55 57.584 58.801 125 226 23 20
115 AGGAAAGTCTCTCTCAACCTCA CAGTTTCGACTGCATTGTGAG 45.455 47.619 58.149 57.821 152 266 22 21
101 ACAATCCATTTCTACGGTCTTCA AGAGATACACTGGAGGCTGAG 39.13 52.381 57.839 58.335 130 230 23 21
145 CTTCAGGAAAGTCTCTCTCAACC ACTCTGGCAAACTGAATTCAAGT 47.826 39.13 58.435 58.79 148 292 23 23
136 CTCTCTCAACCTCAGATGCTAAT CAAACTCTGGCAAACTGAATTCA 43.478 39.13 57.466 58.064 160 295 23 23
146 GAAAGTCTCTCTCAACCTCAGAT CTAACAAACTCTGGCAAACTGAA 43.478 39.13 57.341 57.501 154 299 23 23
100 AGATATTGAAGTTACGACCACCT TGGCAAACTGAATTCAAGTATCC 39.13 39.13 57.066 57.357 189 288 23 23
115 AGGAAAGTCTCTCTCAACCTCA CAGTTTCGACTGCATTGTGAG 45.455 47.619 58.149 57.821 152 266 22 21
101 TCCATTTCTACGGTCTTCAGGA ACAAAGAGATACACTGGAGGCT 45.455 45.455 58.563 58.823 134 234 22 22
102 ACAGTACAATCCATTTCTACGGT ATACACTGGAGGCTGAGGTG 39.13 55 57.584 58.801 125 226 23 20
104 TCTCTCTCAACCTCAGATGCT TTCGACTGCATTGTGAGACA 47.619 45 57.901 57.475 159 262 21 20
101 ACAATCCATTTCTACGGTCTTCA AGAGATACACTGGAGGCTGAG 39.13 52.381 57.839 58.335 130 230 23 21
146 GAAAGTCTCTCTCAACCTCAGAT CTAACAAACTCTGGCAAACTGAA 43.478 39.13 57.341 57.501 154 299 23 23
136 CTCTCTCAACCTCAGATGCTAAT CAAACTCTGGCAAACTGAATTCA 43.478 39.13 57.466 58.064 160 295 23 23
100 AGATATTGAAGTTACGACCACCT TGGCAAACTGAATTCAAGTATCC 39.13 39.13 57.066 57.357 189 288 23 23
145 CTTCAGGAAAGTCTCTCTCAACC ACTCTGGCAAACTGAATTCAAGT 47.826 39.13 58.435 58.79 148 292 23 23
104 TCTCTCTCAACCTCAGATGCT TTCGACTGCATTGTGAGACA 47.619 45 57.901 57.475 159 262 21 20
101 TCCATTTCTACGGTCTTCAGGA ACAAAGAGATACACTGGAGGCT 45.455 45.455 58.563 58.823 134 234 22 22
102 ACAGTACAATCCATTTCTACGGT ATACACTGGAGGCTGAGGTG 39.13 55 57.584 58.801 125 226 23 20
115 AGGAAAGTCTCTCTCAACCTCA CAGTTTCGACTGCATTGTGAG 45.455 47.619 58.149 57.821 152 266 22 21
101 ACAATCCATTTCTACGGTCTTCA AGAGATACACTGGAGGCTGAG 39.13 52.381 57.839 58.335 130 230 23 21
146 GAAAGTCTCTCTCAACCTCAGAT CTAACAAACTCTGGCAAACTGAA 43.478 39.13 57.341 57.501 154 299 23 23
136 CTCTCTCAACCTCAGATGCTAAT CAAACTCTGGCAAACTGAATTCA 43.478 39.13 57.466 58.064 160 295 23 23
145 CTTCAGGAAAGTCTCTCTCAACC ACTCTGGCAAACTGAATTCAAGT 47.826 39.13 58.435 58.79 148 292 23 23
100 AGATATTGAAGTTACGACCACCT TGGCAAACTGAATTCAAGTATCC 39.13 39.13 57.066 57.357 189 288 23 23
104 TCTCTCTCAACCTCAGATGCT TTCGACTGCATTGTGAGACA 47.619 45 57.901 57.475 159 262 21 20
101 TCCATTTCTACGGTCTTCAGGA ACAAAGAGATACACTGGAGGCT 45.455 45.455 58.563 58.823 134 234 22 22
101 ACAATCCATTTCTACGGTCTTCA AGAGATACACTGGAGGCTGAG 39.13 52.381 57.839 58.335 130 230 23 21
102 ACAGTACAATCCATTTCTACGGT ATACACTGGAGGCTGAGGTG 39.13 55 57.584 58.801 125 226 23 20
145 CTTCAGGAAAGTCTCTCTCAACC ACTCTGGCAAACTGAATTCAAGT 47.826 39.13 58.435 58.79 148 292 23 23
136 CTCTCTCAACCTCAGATGCTAAT CAAACTCTGGCAAACTGAATTCA 43.478 39.13 57.466 58.064 160 295 23 23
115 AGGAAAGTCTCTCTCAACCTCA CAGTTTCGACTGCATTGTGAG 45.455 47.619 58.149 57.821 152 266 22 21
146 GAAAGTCTCTCTCAACCTCAGAT CTAACAAACTCTGGCAAACTGAA 43.478 39.13 57.341 57.501 154 299 23 23
100 AGATATTGAAGTTACGACCACCT TGGCAAACTGAATTCAAGTATCC 39.13 39.13 57.066 57.357 189 288 23 23