Aliases hsa_circ_0001564 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr5:179132679-179137066:+
CircRNA type . Gene ID ENSG00000127022.10
Gene Name CANX Detection pipeline .
Sample Type cd_34; Hs68_RNase; Hs68_control; K562; Helas3; H1hesc; Gm12878
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25234927
Aliases HSA_CIRCpedia_51378 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr5:179132679-179137066
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type PA1;HeLa_S3;Parietal;Liver_T3;Liver_N6;Liver_N14;Liver;Liver_T13;Liver_T8;Diencephalon;Liver_N7;NHEK;Liver_N11;Cortex;Forebrain;Liver_T6;Occipital;Temporal;Liver_T7;HUVEC;H9;Liver_T12;A549;Lung;Liver_T15;SH-SY5Y_D0_exp2;Liver_N12;Liver_N15;Stomach;Liver_N13;Liver_N8;H1;SH-SY5Y_D2_exp1;Liver_N10;GM12878;Liver_T10;Cerebellum;SH-SY5Y_D8_exp2;Liver_T14;Liver_N3;Thyroid;Heart;AG04450;Liver_T11;K562;Hs68;Liver_T22;Liver_N21;Liver_T21;Liver_N17;Liver_N22;Liver_T19;Liver_N19;Liver_T17;Liver_T18;Liver_N18;Liver_N20
Method for Estimation poly(A)-;Ribo-;RNaseR
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 30172046
Aliases circ_003156 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr5:179132679-179137066:+
CircRNA type n/a Gene ID ENSG00000127022.10
Gene Name CANX Detection pipeline Find_circ
Sample Type colorectal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25624062
Aliases hsa_circRNA_104030 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr5:179132679-179137066:+
CircRNA type exonic Gene ID ENSG00000127022.10
Gene Name CANX Detection pipeline n/a
Sample Type Esophageal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 27465405
Aliases hsa_circ_0001564 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr5:179132679-179137066:+
CircRNA type N/A Gene ID ENSG00000127022.10
Gene Name CANX Detection pipeline N/A
Sample Type Osteosarcoma
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer CATCCTTTGCGCTCAGAGGA
Reverse Primer GATTGGCCTGACCACAGTCTA
Pubmed 29229385
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
211 TCACGGAGGCTGGAGATTAC cacagcaaccacttcccttc 55 55 58.888 59.046 15 225 20 20
197 AGCAGTTACACCAAGCTCCT TTGGGAGATGAAGGAGGAGC 50 55 58.94 58.792 176 372 20 20
110 GAAAAGTGAGGAAGGCGTGG agcagttccaagcaccagta 55 50 59.125 59.235 141 250 20 20
128 ATTTAACTTACGGGCCAGCC gcaaccacttcccttccatg 50 55 58.241 59.109 94 221 20 20
227 GTGGAAAAGTGAGGAAGGCG TGAAGGAGGAGCAGTGGTATC 55 52.381 59.125 58.889 138 364 20 21
133 GTGGAGTCTCTGTTCTGTGGA caatagcagttccaagcacca 52.381 47.619 59.036 58.838 122 254 21 21
107 CTTGTGGGCAGCAGTTACAC tgtccatcatgagcctcaaca 55 47.619 59.407 59.37 167 273 20 21
112 TCATGTGGAGTCTCTGTTCTGT catacacagcaaccacttccc 45.455 52.381 58.766 59.187 118 229 22 21
132 CCAGCCCTCCTCATGTGG gcaccagtaacatacacagca 66.667 47.619 59.406 58.577 108 239 18 21
114 GAGGAAGGCGTGGGTCTC gcctcaacaatagcagttcca 66.667 47.619 59.42 58.564 148 261 18 21
202 ACACCAAGCTCCTGAGAatca CCATTTCAAACCTTGGGAGATGA 47.619 43.478 59.019 58.911 183 384 21 23
215 AGTTCCATGACAAGACCCCT cacagcaaccacttcccttc 50 55 58.253 59.046 11 225 20 20
176 ACTGCACTTCATCTTCCGAC agcagttccaagcaccagta 50 50 57.914 59.235 75 250 20 20
126 ACATGCTAAGAGGCCAGATG caatagcagttccaagcacca 50 47.619 57.365 58.838 129 254 20 21
144 GCACTTCATCTTCCGACACA gcaaccacttcccttccatg 50 55 58.204 59.109 78 221 20 20
215 CCATGACAAGACCCCTTATACG catacacagcaaccacttccc 50 52.381 58.271 59.187 15 229 22 21
216 TGTGGAGAGGACTATAAACTGCA tgtccatcatgagcctcaaca 43.478 47.619 58.906 59.37 58 273 23 21
229 AGTTCCATGACAAGACCCCTTAT gcaccagtaacatacacagca 43.478 47.619 59.147 58.577 11 239 23 21
183 CACTTCATCTTCCGACACAAAA gcctcaacaatagcagttcca 40.909 47.619 57.188 58.564 79 261 22 21
188 GGAGAGGACTATAAACTGCACTT cagttccaagcaccagtaaca 43.478 47.619 57.654 58.429 61 248 23 21
215 AGTTCCATGACAAGACCCCT cacagcaaccacttcccttc 50 55 58.253 59.046 11 225 20 20
144 GCACTTCATCTTCCGACACA gcaaccacttcccttccatg 50 55 58.204 59.109 78 221 20 20
176 ACTGCACTTCATCTTCCGAC agcagttccaagcaccagta 50 50 57.914 59.235 75 250 20 20
126 ACATGCTAAGAGGCCAGATG caatagcagttccaagcacca 50 47.619 57.365 58.838 129 254 20 21
215 CCATGACAAGACCCCTTATACG catacacagcaaccacttccc 50 52.381 58.271 59.187 15 229 22 21
216 TGTGGAGAGGACTATAAACTGCA tgtccatcatgagcctcaaca 43.478 47.619 58.906 59.37 58 273 23 21
188 GGAGAGGACTATAAACTGCACTT cagttccaagcaccagtaaca 43.478 47.619 57.654 58.429 61 248 23 21
229 AGTTCCATGACAAGACCCCTTAT gcaccagtaacatacacagca 43.478 47.619 59.147 58.577 11 239 23 21
183 CACTTCATCTTCCGACACAAAA gcctcaacaatagcagttcca 40.909 47.619 57.188 58.564 79 261 22 21
144 GCACTTCATCTTCCGACACA gcaaccacttcccttccatg 50 55 58.204 59.109 78 221 20 20
215 AGTTCCATGACAAGACCCCT cacagcaaccacttcccttc 50 55 58.253 59.046 11 225 20 20
176 ACTGCACTTCATCTTCCGAC agcagttccaagcaccagta 50 50 57.914 59.235 75 250 20 20
126 ACATGCTAAGAGGCCAGATG caatagcagttccaagcacca 50 47.619 57.365 58.838 129 254 20 21
215 CCATGACAAGACCCCTTATACG catacacagcaaccacttccc 50 52.381 58.271 59.187 15 229 22 21
216 TGTGGAGAGGACTATAAACTGCA tgtccatcatgagcctcaaca 43.478 47.619 58.906 59.37 58 273 23 21
183 CACTTCATCTTCCGACACAAAA gcctcaacaatagcagttcca 40.909 47.619 57.188 58.564 79 261 22 21
229 AGTTCCATGACAAGACCCCTTAT gcaccagtaacatacacagca 43.478 47.619 59.147 58.577 11 239 23 21
188 GGAGAGGACTATAAACTGCACTT cagttccaagcaccagtaaca 43.478 47.619 57.654 58.429 61 248 23 21