Aliases hsa_circ_0001566 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr5:179688683-179707608:-
CircRNA type . Gene ID ENSG00000050748.13
Gene Name MAPK9 Detection pipeline .
Sample Type cd_19; Hs68_RNase; Hs68_control; K562; Huvec; Hepg2; Helas3; H1hesc; Gm12878; Bj; Ag04450; A549; Nhek; Sknshra; Mcf7
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25234927
Aliases HSA_CIRCpedia_51436 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr5:179688683-179707608
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type Liver_N13;HepG2;Liver_T8;Liver_T10;PA1;Liver_T12;Liver_N10;Diencephalon;Liver_T7;Liver_T6;Liver_N14;HUVEC;Liver_N7;SH-SY5Y_D0_exp1;Cerebellum;SH-SY5Y_D4_exp1;NHEK;Liver_N11;Cortex;SH-SY5Y_D2_exp1;Liver_N3;Parietal;Liver_T13;K562;Liver_N15;Liver_N12;Thyroid;HeLa_S3;SH-SY5Y_D8_exp2;GM12878;Liver_T14;Liver_T3;Liver;H9;A549;Kidney;Liver_T15;Liver_T11;Stomach;Temporal;Heart;AG04450;Occipital;Liver_N6;SH-SY5Y_D0_exp2;H1;Forebrain;SH-SY5Y_D4_exp2;Lung;BJ;Liver_N8;Hs68;Liver_T22;Liver_T17;Liver_T21;Liver_T20;Liver_N17;Liver_N22;Liver_N19;Liver_T19;Liver_N21;Liver_N20;Liver_N18;Liver_T18
Method for Estimation Ribo-;poly(A)-;RNaseR
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 30172046
Aliases circ_008860 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr5:179688683-179707608:-
CircRNA type n/a Gene ID ENSG00000050748.13
Gene Name MAPK9 Detection pipeline Find_circ
Sample Type colorectal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25624062
Aliases chr5:179688683-179707608 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr5:179688683-179707608:n/a
CircRNA type n/a Gene ID ENSG00000050748.13
Gene Name MAPK9 Detection pipeline UROBORUS
Sample Type gliomas
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 26873924
Aliases hsa_circRNA_104036 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr5:179688683-179707608:-
CircRNA type exonic Gene ID ENSG00000050748.13
Gene Name MAPK9 Detection pipeline n/a
Sample Type Esophageal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 27465405
Aliases chr18:107887-108499 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr5:179688683-179707608:-
CircRNA type N/A Gene ID ENSG00000050748.13
Gene Name MAPK9 Detection pipeline N/A
Sample Type Gliomas
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer GCCCCTTTAGGCAGAGCTTA
Reverse Primer CTACAGGGGGCTTGTGACAT
Pubmed 28236760
Aliases hsa_circ_0001566 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr5:179688683-179707608:-
CircRNA type N/A Gene ID ENSG00000050748.13
Gene Name MAPK9 Detection pipeline N/A
Sample Type Gliomas
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer CTTTGTGGTATTAAACATCTGC
Reverse Primer TCACATTTACTGTCGCTCA
Pubmed 28236760
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
237 TCATGATCCAGCTCCATGTGA TGGCAGACTCAACCTTCACT 47.619 50 58.879 58.868 73 309 21 20
300 CCAGCTCCATGTGAATAACCTG CTTCGGGATATTGCAGGACG 50 55 59.052 58.498 80 379 22 20
225 GCTCCATGTGAATAACCTGACA GCAGACTCAACCTTCACTGTC 45.455 52.381 58.39 58.861 83 307 22 21
224 ACATTCTTTCATGATCCAGCTCC TCCTAAAACGTTACCAGCAGC 43.478 47.619 58.794 58.58 65 288 23 21
291 TCTTTCATGATCCAGCTCCATG CTGCATCATGAGCGACAGTA 45.455 50 58.183 57.786 69 359 22 20
217 TGATCCAGCTCCATGTGAATAAC ACTGTCCTAAAACGTTACCAGC 43.478 45.455 58.545 58.603 76 292 23 22
159 TGAGGGAGAAAAGGTCAGTTATT ACCTTCACTGTCCTAAAACGT 39.13 42.857 57.157 57.167 140 298 23 21
237 TCATGATCCAGCTCCATGTGA TGGCAGACTCAACCTTCACT 47.619 50 58.879 58.868 73 309 21 20
300 CCAGCTCCATGTGAATAACCTG CTTCGGGATATTGCAGGACG 50 55 59.052 58.498 80 379 22 20
291 TCTTTCATGATCCAGCTCCATG CTGCATCATGAGCGACAGTA 45.455 50 58.183 57.786 69 359 22 20
224 ACATTCTTTCATGATCCAGCTCC TCCTAAAACGTTACCAGCAGC 43.478 47.619 58.794 58.58 65 288 23 21
225 GCTCCATGTGAATAACCTGACA GCAGACTCAACCTTCACTGTC 45.455 52.381 58.39 58.861 83 307 22 21
159 TGAGGGAGAAAAGGTCAGTTATT ACCTTCACTGTCCTAAAACGT 39.13 42.857 57.157 57.167 140 298 23 21
217 TGATCCAGCTCCATGTGAATAAC ACTGTCCTAAAACGTTACCAGC 43.478 45.455 58.545 58.603 76 292 23 22
237 TCATGATCCAGCTCCATGTGA TGGCAGACTCAACCTTCACT 47.619 50 58.879 58.868 73 309 21 20
225 GCTCCATGTGAATAACCTGACA GCAGACTCAACCTTCACTGTC 45.455 52.381 58.39 58.861 83 307 22 21
300 CCAGCTCCATGTGAATAACCTG CTTCGGGATATTGCAGGACG 50 55 59.052 58.498 80 379 22 20
291 TCTTTCATGATCCAGCTCCATG CTGCATCATGAGCGACAGTA 45.455 50 58.183 57.786 69 359 22 20
217 TGATCCAGCTCCATGTGAATAAC ACTGTCCTAAAACGTTACCAGC 43.478 45.455 58.545 58.603 76 292 23 22
224 ACATTCTTTCATGATCCAGCTCC TCCTAAAACGTTACCAGCAGC 43.478 47.619 58.794 58.58 65 288 23 21
159 TGAGGGAGAAAAGGTCAGTTATT ACCTTCACTGTCCTAAAACGT 39.13 42.857 57.157 57.167 140 298 23 21
300 CCAGCTCCATGTGAATAACCTG CTTCGGGATATTGCAGGACG 50 55 59.052 58.498 80 379 22 20
291 TCTTTCATGATCCAGCTCCATG CTGCATCATGAGCGACAGTA 45.455 50 58.183 57.786 69 359 22 20
225 GCTCCATGTGAATAACCTGACA GCAGACTCAACCTTCACTGTC 45.455 52.381 58.39 58.861 83 307 22 21
224 ACATTCTTTCATGATCCAGCTCC TCCTAAAACGTTACCAGCAGC 43.478 47.619 58.794 58.58 65 288 23 21
237 TCATGATCCAGCTCCATGTGA TGGCAGACTCAACCTTCACT 47.619 50 58.879 58.868 73 309 21 20
217 TGATCCAGCTCCATGTGAATAAC ACTGTCCTAAAACGTTACCAGC 43.478 45.455 58.545 58.603 76 292 23 22
159 TGAGGGAGAAAAGGTCAGTTATT ACCTTCACTGTCCTAAAACGT 39.13 42.857 57.157 57.167 140 298 23 21