| Aliases | hsa_circ_0006411 | Scientific name | Homo sapiens (hg19) | ||||
| Organism | Human | Genome Locus | chr5:67522117-67522837:+ | ||||
| CircRNA type | . | Gene ID | ENSG00000145675.10 | ||||
| Gene Name | PIK3R1 | Detection pipeline | . | ||||
| Sample Type | Hs68_RNase; Hs68_control | ||||||||
| Method for Estimation | RNA-Seq with Rnase R resistance | ||||||||
| Circular RNA status | Experimented | PCR Details | Link to the detailed experimental procedure | ||||||
| Primers (Experimented) | |||||||||
| Primers (Validated) | |||||||||
| Forward Primer | . | ||||||||
| Reverse Primer | . | ||||||||
| Aliases | HSA_CIRCpedia_52280 | Scientific name | Homo sapiens (hg19) | ||||
| Organism | Human | Genome Locus | chr5:67522117-67522837 | ||||
| CircRNA type | . | Gene ID | NA | ||||
| Gene Name | NA | Detection pipeline | . | ||||
| Sample Type | Liver_T7;K562;Liver_N6;Liver_N12;SH-SY5Y_D0_exp2;Liver_N7;Forebrain;Liver_N11;Liver_N8;BJ;Cortex;SH-SY5Y_D0_exp1;Thyroid;SH-SY5Y_D4_exp1;Lung;Temporal;Diencephalon;Liver;PA1;Liver_T13;Liver_N3;Liver_T11;Liver_T14;Liver_T10;Liver_N14;Cerebellum;Liver_T12;Liver_T3;Occipital;Liver_T6;Liver_N15;SH-SY5Y_D2_exp1;Parietal;Stomach;Liver_N10;Heart;Liver_N13;Hs68;Liver_T21;Liver_N18;Liver_T18;Liver_N17;Liver_T22;Liver_T20;Liver_N19;Liver_N22;Liver_T17;Liver_N20;Liver_N21 | ||||||||
| Method for Estimation | Ribo-;poly(A)-;RNaseR | ||||||||
| Circular RNA status | Experimented | PCR Details | Link to the detailed experimental procedure | ||||||
| Primers (Experimented) | |||||||||
| Primers (Validated) | |||||||||
| Forward Primer | . | ||||||||
| Reverse Primer | . | ||||||||
| Aliases | chr5:67522117-67522837 | Scientific name | Homo sapiens (hg19) | ||||
| Organism | Human | Genome Locus | chr5:67522117-67522837:n/a | ||||
| CircRNA type | n/a | Gene ID | ENSG00000145675.10 | ||||
| Gene Name | PIK3R1 | Detection pipeline | UROBORUS | ||||
| Sample Type | gliomas | ||||||||
| Method for Estimation | . | ||||||||
| Circular RNA status | Experimented | PCR Details | Link to the detailed experimental procedure | ||||||
| Primers (Experimented) | |||||||||
| Primers (Validated) | |||||||||
| Forward Primer | . | ||||||||
| Reverse Primer | . | ||||||||
| Aliases | hsa_circ_0006411 | Scientific name | Homo sapiens (hg19) | ||||
| Organism | Human | Genome Locus | chr5:67522117-67522837:+ | ||||
| CircRNA type | N/A | Gene ID | ENSG00000145675.10 | ||||
| Gene Name | PIK3R1 | Detection pipeline | N/A | ||||
| Sample Type | Gliomas | ||||||||
| Method for Estimation | Microarray and Quantitative PCR | ||||||||
| Circular RNA status | Validated | PCR Details | Link to the detailed experimental procedure | ||||||
| Primers (Experimented) | |||||||||
| Primers (Validated) | |||||||||
| Forward Primer | TCTCGCCTCCCACACCAAA | ||||||||
| Reverse Primer | TCCACACACGAGCTTCACC | ||||||||
| Suggested primers | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Product size | Left primer | Right primer | Left GC | Right GC | Left TM | Right TM | Left pos | Right pos | Left size | Right size | |