Aliases hsa_circ_0006411 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr5:67522117-67522837:+
CircRNA type . Gene ID ENSG00000145675.10
Gene Name PIK3R1 Detection pipeline .
Sample Type Hs68_RNase; Hs68_control
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25234927
Aliases HSA_CIRCpedia_52280 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr5:67522117-67522837
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type Liver_T7;K562;Liver_N6;Liver_N12;SH-SY5Y_D0_exp2;Liver_N7;Forebrain;Liver_N11;Liver_N8;BJ;Cortex;SH-SY5Y_D0_exp1;Thyroid;SH-SY5Y_D4_exp1;Lung;Temporal;Diencephalon;Liver;PA1;Liver_T13;Liver_N3;Liver_T11;Liver_T14;Liver_T10;Liver_N14;Cerebellum;Liver_T12;Liver_T3;Occipital;Liver_T6;Liver_N15;SH-SY5Y_D2_exp1;Parietal;Stomach;Liver_N10;Heart;Liver_N13;Hs68;Liver_T21;Liver_N18;Liver_T18;Liver_N17;Liver_T22;Liver_T20;Liver_N19;Liver_N22;Liver_T17;Liver_N20;Liver_N21
Method for Estimation Ribo-;poly(A)-;RNaseR
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 30172046
Aliases chr5:67522117-67522837 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr5:67522117-67522837:n/a
CircRNA type n/a Gene ID ENSG00000145675.10
Gene Name PIK3R1 Detection pipeline UROBORUS
Sample Type gliomas
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 26873924
Aliases hsa_circ_0006411 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr5:67522117-67522837:+
CircRNA type N/A Gene ID ENSG00000145675.10
Gene Name PIK3R1 Detection pipeline N/A
Sample Type Gliomas
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer TCTCGCCTCCCACACCAAA
Reverse Primer TCCACACACGAGCTTCACC
Pubmed 28236760
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
225 GCCTGAAGAAATTGGCTGGT TCTGATTGTACCGTGGCACT 50 50 58.739 59.026 12 236 20 20
127 GTTGCACCAGGTTCTTCGAA GGCCCAATCCTTTCTGACAC 50 55 58.695 58.823 154 280 20 20
204 CCAGGCCTGAAGAAATTGGC CACGAGCTTCACCTTGTTGT 55 50 59.466 58.7 8 211 20 20
212 GAAGCCAGGCCTGAAGAAAT CACACACGAGCTTCACCTTG 50 55 58.155 59.417 4 215 20 20
190 GGACTTTCCGGGAACTTACG TCACACTGTCCATCTGTCGT 55 50 58.282 58.672 66 255 20 20
111 AACAAGGTGAAGCTCGTGTG AATCCAGGCTGACTCTCACA 50 50 58.7 58.351 194 304 20 20
135 AAAATCTCGCCTCCCACACC GTCGTCTGATTGTACCGTGG 55 55 60.323 58.374 106 240 20 20
107 CCTCTTCCTGTTGCACCAG ACTGTCCATCTGTCGTCTGA 57.895 50 58.062 58.089 145 251 19 20
108 GCACCAGGTTCTTCGAAAACT ACACTTTTGTCACACTGTCCA 47.619 42.857 59.053 57.934 157 264 21 21
142 ACTTTCCGGGAACTTACGTAGA CGAGCTTCACCTTGTTGTTCA 45.455 47.619 58.843 59.06 68 209 22 21
122 AACAACAAGGTGAAGCTCGT ACACTTTGAATCCAGGCTGAC 45 47.619 57.962 58.491 191 312 20 21
225 GCCTGAAGAAATTGGCTGGT TCTGATTGTACCGTGGCACT 50 50 58.739 59.026 12 236 20 20
204 CCAGGCCTGAAGAAATTGGC CACGAGCTTCACCTTGTTGT 55 50 59.466 58.7 8 211 20 20
190 GGACTTTCCGGGAACTTACG TCACACTGTCCATCTGTCGT 55 50 58.282 58.672 66 255 20 20
127 GTTGCACCAGGTTCTTCGAA GGCCCAATCCTTTCTGACAC 50 55 58.695 58.823 154 280 20 20
111 AACAAGGTGAAGCTCGTGTG AATCCAGGCTGACTCTCACA 50 50 58.7 58.351 194 304 20 20
212 GAAGCCAGGCCTGAAGAAAT CACACACGAGCTTCACCTTG 50 55 58.155 59.417 4 215 20 20
122 AACAACAAGGTGAAGCTCGT ACACTTTGAATCCAGGCTGAC 45 47.619 57.962 58.491 191 312 20 21
107 CCTCTTCCTGTTGCACCAG ACTGTCCATCTGTCGTCTGA 57.895 50 58.062 58.089 145 251 19 20
135 AAAATCTCGCCTCCCACACC GTCGTCTGATTGTACCGTGG 55 55 60.323 58.374 106 240 20 20
108 GCACCAGGTTCTTCGAAAACT ACACTTTTGTCACACTGTCCA 47.619 42.857 59.053 57.934 157 264 21 21
142 ACTTTCCGGGAACTTACGTAGA CGAGCTTCACCTTGTTGTTCA 45.455 47.619 58.843 59.06 68 209 22 21
225 GCCTGAAGAAATTGGCTGGT TCTGATTGTACCGTGGCACT 50 50 58.739 59.026 12 236 20 20
127 GTTGCACCAGGTTCTTCGAA GGCCCAATCCTTTCTGACAC 50 55 58.695 58.823 154 280 20 20
204 CCAGGCCTGAAGAAATTGGC CACGAGCTTCACCTTGTTGT 55 50 59.466 58.7 8 211 20 20
111 AACAAGGTGAAGCTCGTGTG AATCCAGGCTGACTCTCACA 50 50 58.7 58.351 194 304 20 20
190 GGACTTTCCGGGAACTTACG TCACACTGTCCATCTGTCGT 55 50 58.282 58.672 66 255 20 20
135 AAAATCTCGCCTCCCACACC GTCGTCTGATTGTACCGTGG 55 55 60.323 58.374 106 240 20 20
212 GAAGCCAGGCCTGAAGAAAT CACACACGAGCTTCACCTTG 50 55 58.155 59.417 4 215 20 20
107 CCTCTTCCTGTTGCACCAG ACTGTCCATCTGTCGTCTGA 57.895 50 58.062 58.089 145 251 19 20
122 AACAACAAGGTGAAGCTCGT ACACTTTGAATCCAGGCTGAC 45 47.619 57.962 58.491 191 312 20 21
108 GCACCAGGTTCTTCGAAAACT ACACTTTTGTCACACTGTCCA 47.619 42.857 59.053 57.934 157 264 21 21
142 ACTTTCCGGGAACTTACGTAGA CGAGCTTCACCTTGTTGTTCA 45.455 47.619 58.843 59.06 68 209 22 21