Aliases hsa_circ_0001577 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr6:13632601-13644961:-
CircRNA type . Gene ID ENSG00000010017.12
Gene Name RANBP9 Detection pipeline .
Sample Type HEK293; cd_19; neutr; K562; Hepg2; H1hesc; Bj; Ag04450; A549; Nhek; Sknshra
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25234927
Aliases HSA_CIRCpedia_53636 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr6:13632601-13644961
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type PA1;Forebrain;Liver_T6;Diencephalon;Cerebellum;SH-SY5Y_D4_exp1;Liver_N11;Liver_T3;Liver_T15;Liver_N12;Occipital;H9;GM12878;Thyroid;SH-SY5Y_D2_exp1;H1;SH-SY5Y_D8_exp2;K562;SH-SY5Y_D0_exp1;Stomach;Liver_N8;HeLa_S3;BJ;Liver_N13;Liver_N14;Liver_N10;Liver_T12;Temporal;Liver_T11;Liver_T10;HepG2;Parietal;Heart;NHEK;Liver_N3;Liver_N6;Liver_T14;Liver;Liver_T8;Liver_T7;Liver_N7;A549;Lung;SH-SY5Y_D0_exp2;Liver_N15;AG04450;Cortex;Liver_T13;SH-SY5Y_D4_exp2;Hs68;Liver_N20;Liver_T19;Liver_N21;Liver_N17;Liver_N19;Liver_N18;Liver_N22;Liver_T20;Liver_T17;Liver_T18;Liver_T21;Liver_T22
Method for Estimation Ribo-;poly(A)-;RNaseR
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 30172046
Aliases circ_004004 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr6:13632601-13644961:-
CircRNA type n/a Gene ID ENSG00000010017.12
Gene Name RANBP9 Detection pipeline Find_circ
Sample Type colorectal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25624062
Aliases hsa_circRNA_104061 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr6:13632601-13644961:-
CircRNA type exonic Gene ID ENSG00000010017.12
Gene Name RANBP9 Detection pipeline n/a
Sample Type Esophageal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 27465405
Aliases circRNA BCRC4/hsa_circ_0001577 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr6:13632601-13644961:-
CircRNA type N/A Gene ID ENSG00000010017.12
Gene Name RANBP9 Detection pipeline N/A
Sample Type Bladder cancer
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer GCTGCAAGCAATGAGTGA
Reverse Primer TGCCTGGATTTTGGTTCT
Pubmed 29270748
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
263 tctgtgcctggcttaacttc ACTCCACCAATCCCAAGAGT 50 50 57.815 58.253 36 298 20 20
197 atttgcctttctgtgcctgg ACTCCACTGCCTCATCTGTT 50 50 59.029 58.644 27 223 20 20
120 GCATTCTGGATTGGCAAATGG TCCACTGCCTCATCTGTTCTT 47.619 47.619 58.443 59.019 102 221 21 21
206 cctttctgtgcctggcttaa ACTACCTTCAGTGCACTCCA 50 50 58.09 58.283 32 237 20 20
203 cagtatttgcctttctgtgcc GCACTCCACTGCCTCATCT 47.619 57.895 57.778 59.399 23 225 21 19
107 TGGATGAAGTTGCAGAAGGAAG TCCCAAGAGTAACTAGCATGCA 45.455 45.455 58.585 59.162 182 288 22 22
111 TCTGGATTGGCAAATGGAATCT TGCCTCATCTGTTCTTCCTTCT 40.909 45.455 58.015 59.091 106 216 22 22
206 aaggtGTCAAGGAGCAGAAG AGCATGCAGGAGATTTGGTT 50 45 57.442 57.773 69 274 20 20
100 CAGAAGGAAGAACAGATGAGGC ACCAATCCCAAGAGTAACTAGCA 50 43.478 58.731 59.156 194 293 22 23
181 tgtgcctggcttaacttcttt ACTGCCTCATCTGTTCTTCCT 42.857 47.619 58.056 58.736 38 218 21 21
110 TGTGTTACTGGATGAAGTTGCA AGAGTAACTAGCATGCAGGAGA 40.909 45.455 58.185 58.363 174 283 22 22
104 TCACTGTGTTACTGGATGAAGT GCATGCAGGAGATTTGGTTTCA 40.909 45.455 57.044 59.768 170 273 22 22
217 TTCTTTCTATGGCGGCCTGA ATATGCGGGAGTGGAGAACC 50 55 59.091 59.241 89 305 20 20
234 TGTTTGCAGTGTTCTTGCCA TCGAGAAGGAGAATGGCAGA 45 50 58.819 58.147 14 247 20 20
269 CAACTGGCGTCTCAACTGAC TCCTACTGTGGGGCTTCAAA 55 50 59.138 58.559 120 388 20 20
317 CTTGCAGCTCTCGTCCAAAG GGGCTTCAAACACCAGGAGA 55 55 59.205 59.89 62 378 20 20
290 TTTCTATGGCGGCCTGACTT GTGGGGCTTCAAACACCAG 50 57.895 59.382 58.959 92 381 20 19
318 GCTGTTCACTCATTGCTTGC AGGAGAAGTGGTCGATGCC 50 57.895 58.305 59.099 47 364 20 19
277 CACACAACTGGCGTCTCAAC TGTATCCTACTGTGGGGCTTC 55 52.381 59.695 58.884 116 392 20 21
184 GACTTCCTCCACACAACTGG GAACCAAAATCCAGGCACAGA 55 47.619 58.116 58.761 107 290 20 21
178 CCTGACTTCCTCCACACAAC TCCAGGCACAGATAGATCGA 55 50 58.116 57.635 104 281 20 20
224 TCATTCTTTCTATGGCGGCC GACTATATGCGGGAGTGGAGA 50 52.381 58.033 58.484 86 309 20 21
139 CTCCACACAACTGGCGTCT GAGATCGAGAAGGAGAATGGC 57.895 52.381 59.93 57.975 113 251 19 21
212 GGCCTGACTTCCTCCACAC AGAAGACTATATGCGGGAGTGG 63.158 50 60.003 59.106 102 313 19 22
248 TCCTTAGCTGTTCACTCATTGC ACCAAAATCCAGGCACAGATAG 45.455 45.455 58.662 58.375 41 288 22 22
217 TTCTTTCTATGGCGGCCTGA ATATGCGGGAGTGGAGAACC 50 55 59.091 59.241 89 305 20 20
317 CTTGCAGCTCTCGTCCAAAG GGGCTTCAAACACCAGGAGA 55 55 59.205 59.89 62 378 20 20
290 TTTCTATGGCGGCCTGACTT GTGGGGCTTCAAACACCAG 50 57.895 59.382 58.959 92 381 20 19
318 GCTGTTCACTCATTGCTTGC AGGAGAAGTGGTCGATGCC 50 57.895 58.305 59.099 47 364 20 19
269 CAACTGGCGTCTCAACTGAC TCCTACTGTGGGGCTTCAAA 55 50 59.138 58.559 120 388 20 20
234 TGTTTGCAGTGTTCTTGCCA TCGAGAAGGAGAATGGCAGA 45 50 58.819 58.147 14 247 20 20
277 CACACAACTGGCGTCTCAAC TGTATCCTACTGTGGGGCTTC 55 52.381 59.695 58.884 116 392 20 21
184 GACTTCCTCCACACAACTGG GAACCAAAATCCAGGCACAGA 55 47.619 58.116 58.761 107 290 20 21
224 TCATTCTTTCTATGGCGGCC GACTATATGCGGGAGTGGAGA 50 52.381 58.033 58.484 86 309 20 21
139 CTCCACACAACTGGCGTCT GAGATCGAGAAGGAGAATGGC 57.895 52.381 59.93 57.975 113 251 19 21
212 GGCCTGACTTCCTCCACAC AGAAGACTATATGCGGGAGTGG 63.158 50 60.003 59.106 102 313 19 22
178 CCTGACTTCCTCCACACAAC TCCAGGCACAGATAGATCGA 55 50 58.116 57.635 104 281 20 20
248 TCCTTAGCTGTTCACTCATTGC ACCAAAATCCAGGCACAGATAG 45.455 45.455 58.662 58.375 41 288 22 22
217 TTCTTTCTATGGCGGCCTGA ATATGCGGGAGTGGAGAACC 50 55 59.091 59.241 89 305 20 20
269 CAACTGGCGTCTCAACTGAC TCCTACTGTGGGGCTTCAAA 55 50 59.138 58.559 120 388 20 20
234 TGTTTGCAGTGTTCTTGCCA TCGAGAAGGAGAATGGCAGA 45 50 58.819 58.147 14 247 20 20
290 TTTCTATGGCGGCCTGACTT GTGGGGCTTCAAACACCAG 50 57.895 59.382 58.959 92 381 20 19
317 CTTGCAGCTCTCGTCCAAAG GGGCTTCAAACACCAGGAGA 55 55 59.205 59.89 62 378 20 20
318 GCTGTTCACTCATTGCTTGC AGGAGAAGTGGTCGATGCC 50 57.895 58.305 59.099 47 364 20 19
277 CACACAACTGGCGTCTCAAC TGTATCCTACTGTGGGGCTTC 55 52.381 59.695 58.884 116 392 20 21
184 GACTTCCTCCACACAACTGG GAACCAAAATCCAGGCACAGA 55 47.619 58.116 58.761 107 290 20 21
224 TCATTCTTTCTATGGCGGCC GACTATATGCGGGAGTGGAGA 50 52.381 58.033 58.484 86 309 20 21
178 CCTGACTTCCTCCACACAAC TCCAGGCACAGATAGATCGA 55 50 58.116 57.635 104 281 20 20
139 CTCCACACAACTGGCGTCT GAGATCGAGAAGGAGAATGGC 57.895 52.381 59.93 57.975 113 251 19 21
212 GGCCTGACTTCCTCCACAC AGAAGACTATATGCGGGAGTGG 63.158 50 60.003 59.106 102 313 19 22
248 TCCTTAGCTGTTCACTCATTGC ACCAAAATCCAGGCACAGATAG 45.455 45.455 58.662 58.375 41 288 22 22