Aliases hsa_circ_0001649 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr6:146209155-146216113:-
CircRNA type . Gene ID ENSG00000146414.11
Gene Name SHPRH Detection pipeline .
Sample Type cd_19; Hs68_RNase; Hs68_control; K562; H1hesc; Gm12878; Ag04450; A549; Nhek; Sknshra
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25234927
Aliases HSA_CIRCpedia_53812 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr6:146209155-146216113
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type Liver_T15;Forebrain;Diencephalon;K562;Stomach;SH-SY5Y_D0_exp2;H1;Cortex;Liver_N8;SH-SY5Y_D4_exp2;Cerebellum;Liver_N7;Occipital;Liver_T10;Temporal;Liver_T7;AG04450;Liver_N15;Liver_T12;Liver_T3;Liver;Parietal;Lung;Liver_N11;SH-SY5Y_D2_exp1;Thyroid;Liver_N13;Liver_N10;Liver_N14;PA1;SH-SY5Y_D8_exp2;Liver_N12;Liver_T11;SH-SY5Y_D0_exp1;GM12878;Liver_N3;Heart;Liver_T13;Liver_T8;Liver_N6;NHEK;Liver_T6;Liver_T14;Hs68;Liver_T21;Liver_T17;Liver_N22;Liver_T18;Liver_N21;Liver_N20;Liver_N18;Liver_N19;Liver_T22;Liver_N17;Liver_T19
Method for Estimation Ribo-;poly(A)-;RNaseR
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 30172046
Aliases circ_004166 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr6:146209155-146216113:-
CircRNA type n/a Gene ID ENSG00000146414.11
Gene Name SHPRH Detection pipeline Find_circ
Sample Type colorectal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25624062
Aliases hsa_circ_0001649 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr6:146209155-146216113:-
CircRNA type N/A Gene ID ENSG00000146414.11
Gene Name SHPRH Detection pipeline N/A
Sample Type Liver cell carcinoma
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer AATGCTGAAAACTGCTGAGAGAA
Reverse Primer TTGAGAAAACGAGTGCTTTGG
Pubmed 26600397
Aliases hsa_circRBM23 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr6:146209155-146216113:-
CircRNA type N/A Gene ID ENSG00000146414.11
Gene Name SHPRH Detection pipeline N/A
Sample Type Liver cell carcinoma
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer TATCCTAGCAATACCACCAGCA
Reverse Primer CATGGCCTCAATCACTATGTC
Pubmed 29916745
Aliases hsa_circ_0001649 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr6:146209155-146216113:-
CircRNA type N/A Gene ID ENSG00000146414.11
Gene Name SHPRH Detection pipeline N/A
Sample Type Gliomas
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer AATGCTGAAAACTGCTGAGAGAA
Reverse Primer TTGAGAAAACGAGTGCTTTGG
Pubmed 29421663
Aliases hsa_circ_0001649 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr6:146209155-146216113:-
CircRNA type N/A Gene ID ENSG00000146414.11
Gene Name SHPRH Detection pipeline N/A
Sample Type Pancreatic Ductal Adenocarcinoma
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer AATGCTGAAAACTGCTGAGAGAA
Reverse Primer TTGAGAAAACGAGTGCTTTGG
Pubmed 30018710
Aliases hsa_circ_0001649 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr6:146209155-146216113:-
CircRNA type N/A Gene ID ENSG00000146414.11
Gene Name SHPRH Detection pipeline N/A
Sample Type Digestive System Neoplasm
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer AATGCTGAAAACTGCTGAGAGAA
Reverse Primer TTGAGAAAACGAGTGCTTTGG
Pubmed 28167847
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size