Aliases hsa_circ_0001727 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr7:99621041-99621930:+
CircRNA type . Gene ID ENSG00000197037.10
Gene Name ZSCAN25 Detection pipeline .
Sample Type HEK293; cd_19; cd_34; Hs68_RNase; Hs68_control; Nhek; K562; Huvec; Hsmm; Hepg2; Helas3; H1hesc; Gm12878; Bj; Ag04450; A549; Nhlf; Sknshra; Mcf7
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25234927
Aliases HSA_CIRCpedia_59516 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr7:99621041-99621930
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type Liver;NHEK;Liver_N8;Liver_T10;SH-SY5Y_D4_exp1;Liver_T14;Parietal;Cerebellum;HeLa_S3;Liver_N3;Cortex;AG04450;Temporal;HUVEC;SH-SY5Y_D0_exp1;Liver_T13;SH-SY5Y_D4_exp2;Liver_N10;Liver_N6;Heart;SK_N_SH;SH-SY5Y_D0_exp2;Liver_T8;Liver_T12;PA1;GM12878;SH-SY5Y_D2_exp1;Liver_T3;H9;Liver_T6;Liver_N13;BJ;Liver_N15;Liver_N12;Liver_T7;SH-SY5Y_D8_exp2;K562;Liver_N7;Thyroid;H1;Occipital;Diencephalon;Kidney;A549;Liver_T15;Liver_N11;Liver_T11;HepG2;Liver_N14;Stomach;Lung;Forebrain;Hs68;Liver_T22;Liver_N21;Liver_N20;Liver_T19;Liver_N22;Liver_N19;Liver_N18;Liver_T20;Liver_N17;Liver_T21;Liver_T18;Liver_T17
Method for Estimation Ribo-;poly(A)-;RNaseR
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 30172046
Aliases circ_000152 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr7:99621041-99621930:+
CircRNA type n/a Gene ID ENSG00000197037.10
Gene Name ZSCAN25 Detection pipeline Find_circ
Sample Type colorectal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 25624062
Aliases chr7:99621041-99621930 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr7:99621041-99621930:n/a
CircRNA type n/a Gene ID ENSG00000106261.12
Gene Name ZKSCAN1 Detection pipeline UROBORUS
Sample Type gliomas
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 26873924
Aliases hsa_circRNA_104435 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr7:99621041-99621930:+
CircRNA type exonic Gene ID ENSG00000197037.10
Gene Name ZSCAN25 Detection pipeline n/a
Sample Type Esophageal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 27465405
Aliases hsa_circ_0001727 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr7:99621041-99621930:n/a
CircRNA type n/a Gene ID ENSG00000106261.12
Gene Name ZKSCAN1 Detection pipeline n/a
Sample Type cervical carcinoma
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Pubmed 28080204
Aliases circZKSCAN1 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr7:99621041-99621930:+
CircRNA type N/A Gene ID ENSG00000197037.10
Gene Name ZSCAN25 Detection pipeline N/A
Sample Type Liver cell carcinoma
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer TGTAATGAGTGCGGGAAGG
Reverse Primer AATCAGGTATGAGTTTCGGTTG
Pubmed 28211215
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
273 GTCTTCAGGTCCCAGGTCAA TCCCGTGATTCAGCAGTCAT 55 50 58.943 59.095 38 310 20 20
154 ACCCAGTCCCACTTCAAACA GCAGTCATCATTCAGGCTCC 50 55 59.077 58.693 145 298 20 20
186 CAGGAGTCCTCGAGCTTTGA TCATCATTCAGGCTCCAGGA 55 50 59.109 58.116 109 294 20 20
120 GCCTCTTACAGTCACGAGGA TCAGCAGTCATCATTCAGGC 55 50 58.825 57.966 182 301 20 20
152 GTTCAGGAGTCCTCGAGCTT AGGGTCTGTGCTCACCTTTA 55 50 59.108 58.27 106 257 20 20
242 GAGTCCTCGAGCTTTGACCT ACCATCCTTCTCCTGTGCAG 55 55 59.108 59.383 112 353 20 20
146 CCAGTTCAGGAGTCCTCGAG GCTCACCTTTATGTCCTGGG 60 55 59.186 57.956 103 248 20 20
199 TCCTCGAGCTTTGACCTTCA GCTTCCCGTGATTCAGCAG 50 57.895 58.662 58.907 115 313 20 19
142 AAACCCCGCCTCTTACAGTC GTGGCTTCCCGTGATTCAG 55 57.895 59.676 58.529 175 316 20 19
131 TTTGACCTTCATCACGAGGC GTCTGTGCTCACCTTTATGTCC 50 50 58.192 58.997 124 254 20 22
148 AACATTCGTCTCGGAAACCC CCGTGATTCAGCAGTCATCAT 50 47.619 58.195 58.442 161 308 20 21
154 ACCCAGTCCCACTTCAAACA GCAGTCATCATTCAGGCTCC 50 55 59.077 58.693 145 298 20 20
273 GTCTTCAGGTCCCAGGTCAA TCCCGTGATTCAGCAGTCAT 55 50 58.943 59.095 38 310 20 20
152 GTTCAGGAGTCCTCGAGCTT AGGGTCTGTGCTCACCTTTA 55 50 59.108 58.27 106 257 20 20
242 GAGTCCTCGAGCTTTGACCT ACCATCCTTCTCCTGTGCAG 55 55 59.108 59.383 112 353 20 20
186 CAGGAGTCCTCGAGCTTTGA TCATCATTCAGGCTCCAGGA 55 50 59.109 58.116 109 294 20 20
120 GCCTCTTACAGTCACGAGGA TCAGCAGTCATCATTCAGGC 55 50 58.825 57.966 182 301 20 20
146 CCAGTTCAGGAGTCCTCGAG GCTCACCTTTATGTCCTGGG 60 55 59.186 57.956 103 248 20 20
142 AAACCCCGCCTCTTACAGTC GTGGCTTCCCGTGATTCAG 55 57.895 59.676 58.529 175 316 20 19
199 TCCTCGAGCTTTGACCTTCA GCTTCCCGTGATTCAGCAG 50 57.895 58.662 58.907 115 313 20 19
148 AACATTCGTCTCGGAAACCC CCGTGATTCAGCAGTCATCAT 50 47.619 58.195 58.442 161 308 20 21
131 TTTGACCTTCATCACGAGGC GTCTGTGCTCACCTTTATGTCC 50 50 58.192 58.997 124 254 20 22
273 GTCTTCAGGTCCCAGGTCAA TCCCGTGATTCAGCAGTCAT 55 50 58.943 59.095 38 310 20 20
154 ACCCAGTCCCACTTCAAACA GCAGTCATCATTCAGGCTCC 50 55 59.077 58.693 145 298 20 20
186 CAGGAGTCCTCGAGCTTTGA TCATCATTCAGGCTCCAGGA 55 50 59.109 58.116 109 294 20 20
242 GAGTCCTCGAGCTTTGACCT ACCATCCTTCTCCTGTGCAG 55 55 59.108 59.383 112 353 20 20
120 GCCTCTTACAGTCACGAGGA TCAGCAGTCATCATTCAGGC 55 50 58.825 57.966 182 301 20 20
152 GTTCAGGAGTCCTCGAGCTT AGGGTCTGTGCTCACCTTTA 55 50 59.108 58.27 106 257 20 20
146 CCAGTTCAGGAGTCCTCGAG GCTCACCTTTATGTCCTGGG 60 55 59.186 57.956 103 248 20 20
148 AACATTCGTCTCGGAAACCC CCGTGATTCAGCAGTCATCAT 50 47.619 58.195 58.442 161 308 20 21
131 TTTGACCTTCATCACGAGGC GTCTGTGCTCACCTTTATGTCC 50 50 58.192 58.997 124 254 20 22
199 TCCTCGAGCTTTGACCTTCA GCTTCCCGTGATTCAGCAG 50 57.895 58.662 58.907 115 313 20 19
142 AAACCCCGCCTCTTACAGTC GTGGCTTCCCGTGATTCAG 55 57.895 59.676 58.529 175 316 20 19
273 GTCTTCAGGTCCCAGGTCAA TCCCGTGATTCAGCAGTCAT 55 50 58.943 59.095 38 310 20 20
154 ACCCAGTCCCACTTCAAACA GCAGTCATCATTCAGGCTCC 50 55 59.077 58.693 145 298 20 20
242 GAGTCCTCGAGCTTTGACCT ACCATCCTTCTCCTGTGCAG 55 55 59.108 59.383 112 353 20 20
152 GTTCAGGAGTCCTCGAGCTT AGGGTCTGTGCTCACCTTTA 55 50 59.108 58.27 106 257 20 20
186 CAGGAGTCCTCGAGCTTTGA TCATCATTCAGGCTCCAGGA 55 50 59.109 58.116 109 294 20 20
142 AAACCCCGCCTCTTACAGTC GTGGCTTCCCGTGATTCAG 55 57.895 59.676 58.529 175 316 20 19
120 GCCTCTTACAGTCACGAGGA TCAGCAGTCATCATTCAGGC 55 50 58.825 57.966 182 301 20 20
146 CCAGTTCAGGAGTCCTCGAG GCTCACCTTTATGTCCTGGG 60 55 59.186 57.956 103 248 20 20
199 TCCTCGAGCTTTGACCTTCA GCTTCCCGTGATTCAGCAG 50 57.895 58.662 58.907 115 313 20 19
148 AACATTCGTCTCGGAAACCC CCGTGATTCAGCAGTCATCAT 50 47.619 58.195 58.442 161 308 20 21
131 TTTGACCTTCATCACGAGGC GTCTGTGCTCACCTTTATGTCC 50 50 58.192 58.997 124 254 20 22