Aliases hsa_circ_0003575 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr9:33271149-33278223:+
CircRNA type . Gene ID ENSG00000086065.9
Gene Name CHMP5 Detection pipeline .
Sample Type Hs68_RNase; Hs68_control
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases HSA_CIRCpedia_63854 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr9:33271149-33278223
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type Liver_N10;Liver_N3;Liver_T3;PA1;Liver_T7;SH-SY5Y_D2_exp1;A549;Liver_N12;SH-SY5Y_D0_exp1;SH-SY5Y_D4_exp1;Liver_N11;GM12878;Lung;SH-SY5Y_D4_exp2;Cerebellum;Parietal;Cortex;HepG2;SH-SY5Y_D8_exp2;Thyroid;Liver;Liver_N7;Liver_N8;Liver_N15;K562;Liver_T10;Liver_N13;Forebrain;Stomach;Liver_T11;Liver_T12;Liver_N14;Liver_N6;Diencephalon;Heart;Liver_T14;Occipital;Liver_T13;AG04450;Temporal;Hs68;Liver_N18;Liver_N21;Liver_T19;Liver_T20;Liver_N19;Liver_N17;Liver_T21;Liver_N20;Liver_T17;Liver_T18;Liver_N22;Liver_T22
Method for Estimation Ribo-;poly(A)-;RNaseR
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases hsa_circ_0003575 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr9:33271149-33278223:+
CircRNA type N/A Gene ID ENSG00000086065.9
Gene Name CHMP5 Detection pipeline N/A
Sample Type Atherosclerosis
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer CATCCGCTACCTCATCTCGT
Reverse Primer GTTGCTACCACCACTCCCATA
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
323 AGCTTTCGACAGGCTCTACA cacatgcacactCGTTTGGA 50 50 58.742 59.056 19 341 20 20
339 GTGCATCCCATCAGTTCTGG gcagccccaagattcagttc 55 55 58.613 59.186 43 381 20 20
314 TCGACAGGCTCTACATGAAGT tgcacactCGTTTGGATTCTC 47.619 47.619 58.553 58.857 24 337 21 21
179 TCCACTATTGATCTGACCTGCA GGTCGATCTTCACTTGCTTGT 45.455 47.619 58.893 58.582 85 263 22 21
159 ACTGCTACTTCGTTGATGCT tcctatcacatgcacactCGT 45 47.619 57.249 59.175 189 347 20 21
218 CGACTCTTTCAGGTAGGACACT cctctcctgtgctcttcctat 50 52.381 59.179 58.323 145 362 22 21
332 CTTTCGACAGGCTCTACATGA gctcttcctatcacatgcaca 47.619 47.619 57.49 58.09 21 352 21 21
226 CCCGACTCTTTCAGGTAGGA tcagttcctctcctgtgctc 55 55 58.151 58.739 143 368 20 20
196 CCATGGCTCTGAAATCCACT TCTGGTCGATCTTCACTTGCT 50 47.619 57.568 59.104 71 266 20 21
341 GAAGAGCTTTCGACAGGCT tgtgctcttcctatcacatgc 52.632 47.619 57.476 58.09 15 355 19 21
149 CCATGGCTCTGAAATCCACTATT CCCAGTTTCATAGCATCAACGA 43.478 45.455 58.532 58.73 71 219 23 22
213 ACTGGTTACTGCTACTTCGTTG ctactagtaaatggcagcccc 45.455 52.381 58.35 57.873 182 394 22 21
147 ACTGCTACTTCGTTGATGCTATG cacactCGTTTGGATTCTCTCA 43.478 45.455 58.884 58.347 189 335 23 22
118 TCTTTACCCGACTCTTTCAGG TCACTTGCTTGTATGCCTTCT 47.619 42.857 57.044 57.576 137 254 21 21
310 AGCTGCCAGTTTTCTTGGTT cacatgcacactCGTTTGGA 45 50 58.219 59.056 32 341 20 20
282 TCAGAGTTGGATGCACTAGGT ttcctctcctgtgctcttcc 47.619 55 58.46 58.729 83 364 21 20
302 TCAATCTCAGAGTTGGATGCAC gccccaagattcagttcctc 45.455 55 58.396 58.244 77 378 22 20
234 GCTGCCAGTTTTCTTGGTTACA TCTGGTCGATCTTCACTTGCT 45.455 47.619 59.639 59.104 33 266 22 21
217 TCTTATTTGGATGAGGCAGCA tcctatcacatgcacactCGT 42.857 47.619 57.35 59.175 131 347 21 21
220 TGCCAGTTTTCTTGGTTACATTT TCACTTGCTTGTATGCCTTCT 34.783 42.857 57.394 57.576 35 254 23 21
138 ACAGTTCTTATTTGGATGAGGCA GGTCGATCTTCACTTGCTTGT 39.13 47.619 58.078 58.582 126 263 23 21