| Aliases | hsa_circ_0001946 | Scientific name | Homo sapiens (hg19) | ||||
| Organism | Human | Genome Locus | chrX:139865339-139866824:+ | ||||
| CircRNA type | . | Gene ID | ENSG00000184258.5 | ||||
| Gene Name | CDR1 | Detection pipeline | . | ||||
| Sample Type | HEK293 | ||||||||
| Method for Estimation | RNA-Seq with Rnase R resistance | ||||||||
| Circular RNA status | Experimented | PCR Details | Link to the detailed experimental procedure | ||||||
| Primers (Experimented) | |||||||||
| Primers (Validated) | |||||||||
| Forward Primer | . | ||||||||
| Reverse Primer | . | ||||||||
| Aliases | HSA_CIRCpedia_118407 | Scientific name | Homo sapiens (hg19) | ||||
| Organism | Human | Genome Locus | chrX:139865339-139866824 | ||||
| CircRNA type | . | Gene ID | NA | ||||
| Gene Name | NA | Detection pipeline | . | ||||
| Sample Type | Liver_N6;SH-SY5Y_D0_exp2;Lung;Liver_T15;H9;Liver_T12;Occipital;Diencephalon;Liver_N12;AG04450;PA1;SK_N_SH;Liver_N8;Liver_N7;Cerebellum;Parietal;Liver_T10;H1;Liver_T6;Liver_T14;Liver;SH-SY5Y_D0_exp1;Forebrain;Liver_T11;Stomach;Liver_N10;SH-SY5Y_D4_exp1;Liver_T13;Heart;Liver_T7;Liver_N3;Liver_N14;Liver_N15;Kidney;BJ;NHEK;Liver_T3;Thyroid;Cortex;A549;SH-SY5Y_D4_exp2;Temporal;Liver_N13;Liver_N11;HUVEC;Liver_T8;Hs68 | ||||||||
| Method for Estimation | Ribo-;poly(A)-;RNaseR | ||||||||
| Circular RNA status | Experimented | PCR Details | Link to the detailed experimental procedure | ||||||
| Primers (Experimented) | |||||||||
| Primers (Validated) | |||||||||
| Forward Primer | . | ||||||||
| Reverse Primer | . | ||||||||
| Aliases | HSA_CIRCpedia_181495 | Scientific name | Homo sapiens (hg19) | ||||
| Organism | Human | Genome Locus | chrX:139865339-139866824 | ||||
| CircRNA type | . | Gene ID | NA | ||||
| Gene Name | NA | Detection pipeline | . | ||||
| Sample Type | Liver_T20;Liver_N19;Liver_N20;Liver_T22;Liver_N22;Liver_T21;Liver_N21;Liver_T17;Liver_T19;Liver_N17 | ||||||||
| Method for Estimation | Ribo- | ||||||||
| Circular RNA status | Experimented | PCR Details | Link to the detailed experimental procedure | ||||||
| Primers (Experimented) | |||||||||
| Primers (Validated) | |||||||||
| Forward Primer | . | ||||||||
| Reverse Primer | . | ||||||||
| Aliases | circ_004277 | Scientific name | Homo sapiens (hg19) | ||||
| Organism | Human | Genome Locus | chrX:139865339-139866824:+ | ||||
| CircRNA type | n/a | Gene ID | ENSG00000184258.5 | ||||
| Gene Name | CDR1 | Detection pipeline | Find_circ | ||||
| Sample Type | colorectal cancer | ||||||||
| Method for Estimation | . | ||||||||
| Circular RNA status | Experimented | PCR Details | Link to the detailed experimental procedure | ||||||
| Primers (Experimented) | |||||||||
| Primers (Validated) | |||||||||
| Forward Primer | . | ||||||||
| Reverse Primer | . | ||||||||
| Aliases | hsa_circRNA_105055 | Scientific name | Homo sapiens (hg19) | ||||
| Organism | Human | Genome Locus | chrX:139865339-139866824:+ | ||||
| CircRNA type | antisense | Gene ID | ENSG00000184258.5 | ||||
| Gene Name | CDR1 | Detection pipeline | n/a | ||||
| Sample Type | Esophageal cancer | ||||||||
| Method for Estimation | . | ||||||||
| Circular RNA status | Experimented | PCR Details | Link to the detailed experimental procedure | ||||||
| Primers (Experimented) | |||||||||
| Primers (Validated) | |||||||||
| Forward Primer | . | ||||||||
| Reverse Primer | . | ||||||||
| Aliases | hsa_circ_0001946 | Scientific name | Homo sapiens (hg19) | ||||
| Organism | Human | Genome Locus | chrX:139865339-139866824:+ | ||||
| CircRNA type | N/A | Gene ID | ENSG00000184258.5 | ||||
| Gene Name | CDR1 | Detection pipeline | N/A | ||||
| Sample Type | Pancreatic Ductal Adenocarcinoma | ||||||||
| Method for Estimation | Microarray and Quantitative PCR | ||||||||
| Circular RNA status | Validated | PCR Details | Link to the detailed experimental procedure | ||||||
| Primers (Experimented) | |||||||||
| Primers (Validated) | |||||||||
| Forward Primer | ACGTCTCCAGTGTGCTGA | ||||||||
| Reverse Primer | CTTGACACAGGTGCCATC | ||||||||
| Suggested primers | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Product size | Left primer | Right primer | Left GC | Right GC | Left TM | Right TM | Left pos | Right pos | Left size | Right size | |