| Aliases | hsa_circ_0023404 | Scientific name | Homo sapiens (hg19) | ||||
| Organism | Human | Genome Locus | chr11:71668272-71671937:+ | ||||
| CircRNA type | . | Gene ID | ENSG00000239481.1 | ||||
| Gene Name | RPS3AP41 | Detection pipeline | . | ||||
| Sample Type | K562; Hepg2; Helas3; H1hesc; Gm12878; Bj; Ag04450; A549 | ||||||||
| Method for Estimation | RNA-Seq with Rnase R resistance | ||||||||
| Circular RNA status | Experimented | PCR Details | Link to the detailed experimental procedure | ||||||
| Primers (Experimented) | |||||||||
| Primers (Validated) | |||||||||
| Forward Primer | . | ||||||||
| Reverse Primer | . | ||||||||
| Aliases | HSA_CIRCpedia_5467 | Scientific name | Homo sapiens (hg19) | ||||
| Organism | Human | Genome Locus | chr11:71668272-71671937 | ||||
| CircRNA type | . | Gene ID | NA | ||||
| Gene Name | NA | Detection pipeline | . | ||||
| Sample Type | A549;AG04450;BJ;HeLa_S3;GM12878;H1;PA1 | ||||||||
| Method for Estimation | poly(A)-;RNaseR | ||||||||
| Circular RNA status | Experimented | PCR Details | Link to the detailed experimental procedure | ||||||
| Primers (Experimented) | |||||||||
| Primers (Validated) | |||||||||
| Forward Primer | . | ||||||||
| Reverse Primer | . | ||||||||
| Aliases | hsa_circRNA_100876 | Scientific name | Homo sapiens (hg19) | ||||
| Organism | Human | Genome Locus | chr11:71668272-71671937:+ | ||||
| CircRNA type | exonic | Gene ID | ENSG00000239481.1 | ||||
| Gene Name | RPS3AP41 | Detection pipeline | n/a | ||||
| Sample Type | Esophageal cancer | ||||||||
| Method for Estimation | . | ||||||||
| Circular RNA status | Experimented | PCR Details | Link to the detailed experimental procedure | ||||||
| Primers (Experimented) | |||||||||
| Primers (Validated) | |||||||||
| Forward Primer | . | ||||||||
| Reverse Primer | . | ||||||||
| Aliases | Circ-CER/circRNA_100876/hsa_circ_0023404 | Scientific name | Homo sapiens (hg19) | ||||
| Organism | Human | Genome Locus | chr11:71668272-71671937:+ | ||||
| CircRNA type | N/A | Gene ID | ENSG00000239481.1 | ||||
| Gene Name | RPS3AP41 | Detection pipeline | N/A | ||||
| Sample Type | Osteoarthritis | ||||||||
| Method for Estimation | Microarray and Quantitative PCR | ||||||||
| Circular RNA status | Validated | PCR Details | Link to the detailed experimental procedure | ||||||
| Primers (Experimented) | |||||||||
| Primers (Validated) | |||||||||
| Forward Primer | CTGGTGCAGTGGAAGCAGAG | ||||||||
| Reverse Primer | CGACCCTCCATTGCTCTTCT | ||||||||
| Aliases | circRNA-CER | Scientific name | Homo sapiens (hg19) | ||||
| Organism | Human | Genome Locus | chr11:71668272-71671937:+ | ||||
| CircRNA type | N/A | Gene ID | ENSG00000239481.1 | ||||
| Gene Name | RPS3AP41 | Detection pipeline | N/A | ||||
| Sample Type | Osteoarthritis | ||||||||
| Method for Estimation | Microarray and Quantitative PCR | ||||||||
| Circular RNA status | Validated | PCR Details | Link to the detailed experimental procedure | ||||||
| Primers (Experimented) | |||||||||
| Primers (Validated) | |||||||||
| Forward Primer | CTGGTGCAGTGGAAGCAGAG | ||||||||
| Reverse Primer | CGACCCTCCATTGCTCTTCT | ||||||||
| Aliases | hsa_circ_0023404/circRNA_100876/circ-CER | Scientific name | Homo sapiens (hg19) | ||||
| Organism | Human | Genome Locus | chr11:71668272-71671937:+ | ||||
| CircRNA type | N/A | Gene ID | ENSG00000239481.1 | ||||
| Gene Name | RPS3AP41 | Detection pipeline | N/A | ||||
| Sample Type | Non-small cell lung cancer | ||||||||
| Method for Estimation | Microarray and Quantitative PCR | ||||||||
| Circular RNA status | Validated | PCR Details | Link to the detailed experimental procedure | ||||||
| Primers (Experimented) | |||||||||
| Primers (Validated) | |||||||||
| Forward Primer | CTGGTGCAGTGGAAGCAGAG | ||||||||
| Reverse Primer | CGACCCTCCATTGCTCTTCT | ||||||||
| Suggested primers | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Product size | Left primer | Right primer | Left GC | Right GC | Left TM | Right TM | Left pos | Right pos | Left size | Right size | |