Aliases hsa_circ_0003570 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr10:126370175-126384781:-
CircRNA type . Gene ID ENSG00000189319.9;ENSG00000258539.1
Gene Name FAM53B;RP11-12J10.3 Detection pipeline .
Sample Type Hs68_RNase; Hs68_control; Nhek; K562; Hsmm; Hepg2; Helas3; H1hesc; Gm12878; Bj; Ag04450; A549; Sknshra
Method for Estimation RNA-Seq with Rnase R resistance
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases HSA_CIRCpedia_827 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr10:126370175-126384781
CircRNA type . Gene ID NA
Gene Name NA Detection pipeline .
Sample Type NHEK;H1;AG04450;K562;PA1;HepG2;SK_N_SH;Liver_T3;Lung;Forebrain;Liver_N6;HeLa_S3;Liver_N8;Stomach;H9;Thyroid;Temporal;Liver_N11;Liver_N15;SH-SY5Y_D0_exp1;A549;Liver_T6;Cerebellum;Parietal;Diencephalon;SH-SY5Y_D8_exp2;GM12878;Liver_N10;Liver_T8;Cortex;Heart;BJ;Occipital;Hs68;Liver_N17;Liver_T17;Liver_N19;Liver_N21
Method for Estimation poly(A)-;RNaseR;Ribo-
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases circ_008017 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr10:126370175-126384781:-
CircRNA type n/a Gene ID ENSG00000189319.9;ENSG00000258539.1
Gene Name FAM53B;RP11-12J10.3 Detection pipeline Find_circ
Sample Type colorectal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases hsa_circRNA_100709 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr10:126370175-126384781:-
CircRNA type exonic Gene ID ENSG00000189319.9;ENSG00000258539.1
Gene Name FAM53B;RP11-12J10.3 Detection pipeline n/a
Sample Type Esophageal cancer
Method for Estimation .
Circular RNA status Experimented PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer .
Reverse Primer .
Aliases hsa_circ_0003570 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr10:126370175-126384781:-
CircRNA type N/A Gene ID ENSG00000189319.9;ENSG00000258539.1
Gene Name FAM53B;RP11-12J10.3 Detection pipeline N/A
Sample Type Liver cell carcinoma
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer CAAGATGGCACAGCAGCACACGC
Reverse Primer ATGCTGGTGCTCGGTTGGTC
Aliases hsa_circRNA_100709/hsa_circ_0003570 Scientific name Homo sapiens (hg19)
Organism Human Genome Locus chr10:126370175-126384781:-
CircRNA type N/A Gene ID ENSG00000189319.9;ENSG00000258539.1
Gene Name FAM53B;RP11-12J10.3 Detection pipeline N/A
Sample Type Infantile Hemangioma (IH)
Method for Estimation Microarray and Quantitative PCR
Circular RNA status Validated PCR Details Link to the detailed experimental procedure
Primers (Experimented)
Primers (Validated)
Forward Primer AAGATGGCACAGCACACGC
Reverse Primer CTGTCATTTTCCATAATTCCACA
Suggested primers
Product size Left primer Right primer Left GC Right GC Left TM Right TM Left pos Right pos Left size Right size
306 TGGCAAGGTCTAGAGAAGGC GTCCTCCTAGTCCTTCCAGC 55 60 59.095 58.884 11 316 20 20
148 TCGTTAAGGACACACGGCT CCGGGACTCTTCTGTGTGTT 52.632 55 58.956 59.607 82 229 19 20
182 CTCTGGTGTTGAGGCAGGT GAAGCTGTCCTCCTAGTCCT 57.895 55 59.243 57.847 141 322 19 20
262 CGCCTTTTAACACCGACCTT GCTGTCCTCCTAGTCCTTCC 50 60 58.768 58.884 58 319 20 20
211 TTAAGGACACACGGCTGGG AGGGTCTGAGTCCTCCAGG 57.895 63.158 59.627 59.61 85 295 19 19
102 CTGTTGGCTGAGGGAGGAC AGCACTTTCTGGACACAAGT 63.158 45 59.702 57.282 163 264 19 20
125 TGGTGTTGAGGCAGGTGTG TCAAAGCACTTTCTGGACACA 57.895 42.857 60.153 58.002 144 268 19 21
178 GCGCCGCCTTTTAACACC CCCCGGGACTCTTCTGTG 61.111 66.667 60.127 59.018 54 231 18 18
212 CTTTTAACACCGACCTTCTTGTC ACACTCAAAGCACTTTCTGGAC 43.478 45.455 57.908 59.054 61 272 23 22
306 TGGCAAGGTCTAGAGAAGGC GTCCTCCTAGTCCTTCCAGC 55 60 59.095 58.884 11 316 20 20
262 CGCCTTTTAACACCGACCTT GCTGTCCTCCTAGTCCTTCC 50 60 58.768 58.884 58 319 20 20
148 TCGTTAAGGACACACGGCT CCGGGACTCTTCTGTGTGTT 52.632 55 58.956 59.607 82 229 19 20
182 CTCTGGTGTTGAGGCAGGT GAAGCTGTCCTCCTAGTCCT 57.895 55 59.243 57.847 141 322 19 20
211 TTAAGGACACACGGCTGGG AGGGTCTGAGTCCTCCAGG 57.895 63.158 59.627 59.61 85 295 19 19
102 CTGTTGGCTGAGGGAGGAC AGCACTTTCTGGACACAAGT 63.158 45 59.702 57.282 163 264 19 20
125 TGGTGTTGAGGCAGGTGTG TCAAAGCACTTTCTGGACACA 57.895 42.857 60.153 58.002 144 268 19 21
178 GCGCCGCCTTTTAACACC CCCCGGGACTCTTCTGTG 61.111 66.667 60.127 59.018 54 231 18 18
212 CTTTTAACACCGACCTTCTTGTC ACACTCAAAGCACTTTCTGGAC 43.478 45.455 57.908 59.054 61 272 23 22
262 CGCCTTTTAACACCGACCTT GCTGTCCTCCTAGTCCTTCC 50 60 58.768 58.884 58 319 20 20
306 TGGCAAGGTCTAGAGAAGGC GTCCTCCTAGTCCTTCCAGC 55 60 59.095 58.884 11 316 20 20
182 CTCTGGTGTTGAGGCAGGT GAAGCTGTCCTCCTAGTCCT 57.895 55 59.243 57.847 141 322 19 20
211 TTAAGGACACACGGCTGGG AGGGTCTGAGTCCTCCAGG 57.895 63.158 59.627 59.61 85 295 19 19
148 TCGTTAAGGACACACGGCT CCGGGACTCTTCTGTGTGTT 52.632 55 58.956 59.607 82 229 19 20
102 CTGTTGGCTGAGGGAGGAC AGCACTTTCTGGACACAAGT 63.158 45 59.702 57.282 163 264 19 20
125 TGGTGTTGAGGCAGGTGTG TCAAAGCACTTTCTGGACACA 57.895 42.857 60.153 58.002 144 268 19 21
178 GCGCCGCCTTTTAACACC CCCCGGGACTCTTCTGTG 61.111 66.667 60.127 59.018 54 231 18 18
212 CTTTTAACACCGACCTTCTTGTC ACACTCAAAGCACTTTCTGGAC 43.478 45.455 57.908 59.054 61 272 23 22